RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SERPINA11Q86U17 422 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 STEAP2Q8NFT2 490 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 CKAP2Q8WWK9 683 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 NEUROG1Q92886 237 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 KISS1RQ969F8 398 aaPredicted RBP15.68■□□□□ 0.1
PNKP-230ENST00000638016 CCL19Q99731 98 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 GSX1Q9H4S2 264 aaPredicted RBP15.68■□□□□ 0.1
PNKP-230ENST00000638016 DLL4Q9NR61 685 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 VAPAQ9P0L0 249 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 HDGFL3Q9Y3E1 203 aa15.68■□□□□ 0.1
PNKP-230ENST00000638016 IGKV3D-15A0A087WSY6 115 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 FPR1P21462 350 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 ITGADQ13349 1161 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 GNA13Q14344 377 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 STK11Q15831 433 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 LRIF1Q5T3J3 769 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 RNF220Q5VTB9 566 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 Q6ZT83 130 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 GALNT5Q7Z7M9 940 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 NFKBIDQ8NI38 313 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 TACO1Q9BSH4 297 aaKnown RBP15.67■□□□□ 0.1
PNKP-230ENST00000638016 TMEM204Q9BSN7 226 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 ADAM19Q9H013 955 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 OR10A4Q9H209 315 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 A4GALTQ9NPC4 353 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 FANCFQ9NPI8 374 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 BEX4Q9NWD9 120 aaPredicted RBP15.67■□□□□ 0.1
PNKP-230ENST00000638016 CALML5Q9NZT1 146 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 TMEM181Q9P2C4 612 aa15.67■□□□□ 0.1
PNKP-230ENST00000638016 TRBV5-3A0A0A0MS03 114 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 FAAHO00519 579 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 BMP2P12643 396 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 MAGEA8P43361 318 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 HTR3AP46098 478 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 NKX6-1P78426 367 aaPredicted RBP15.66■□□□□ 0.1
PNKP-230ENST00000638016 H3F3AP84243 136 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 CAPRIN1Q14444 709 aaKnown RBP15.66■□□□□ 0.1
PNKP-230ENST00000638016 ZNF100Q8IYN0 542 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 GOLGA6L1Q8N7Z2 621 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 LILRB1Q8NHL6 650 aaPredicted RBP15.66■□□□□ 0.1
PNKP-230ENST00000638016 ZHX1-C8orf76Q96EF9 292 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 PERPQ96FX8 193 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 SMR3AQ99954 134 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 DCTN4Q9UJW0 460 aa15.66■□□□□ 0.1
PNKP-230ENST00000638016 NOSIPQ9Y314 301 aaKnown RBP15.66■□□□□ 0.1
PNKP-230ENST00000638016 A0A0G2JPF8 293 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 HNRNPCL2B2RXH8 293 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 HNRNPCL3B7ZW38 293 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 ZNF208O43345 1280 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 HNRNPCL1O60812 293 aaKnown RBP15.65■□□□□ 0.1
PNKP-230ENST00000638016 AKR7A3O95154 331 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 PGM3O95394 542 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 THBS1P07996 1170 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 HNRNPCL4P0DMR1 293 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 COX5AP20674 150 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 CEACAM7Q14002 265 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 SQLEQ14534 574 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 OR7A5Q15622 319 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 GLIPR1L2Q4G1C9 344 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 ZNF311Q5JNZ3 666 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 Q5PR19 223 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 TMEM99Q8N816 258 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 OR52E4Q8NGH9 312 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 PIGXQ8TBF5 258 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 AKAP1Q92667 903 aaKnown RBP eCLIP15.65■□□□□ 0.1
PNKP-230ENST00000638016 DDIT4LQ96D03 193 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 MAGEB18Q96M61 343 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 PRR14Q9BWN1 585 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 SPATA9Q9BWV2 254 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 HDHD5Q9BXW7 423 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 POTEKPQ9BYX7 375 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 VIPAS39Q9H9C1 493 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 NPHS2Q9NP85 383 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 NPAP1Q9NZP6 1156 aa15.65■□□□□ 0.1
PNKP-230ENST00000638016 A0A1W2PR80 420 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 CLOCKO15516 846 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 SMPD2O60906 423 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 RAD51DO75771 328 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 ARAFP10398 606 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 NCF2P19878 526 aaPredicted RBP15.64■□□□□ 0.09
PNKP-230ENST00000638016 CLK1P49759 484 aaKnown RBP15.64■□□□□ 0.09
PNKP-230ENST00000638016 SLC16A1P53985 500 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 NR1H2P55055 460 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 SF3A3Q12874 501 aaKnown RBP eCLIP15.64■□□□□ 0.09
PNKP-230ENST00000638016 FADDQ13158 208 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 LARS2Q15031 903 aaKnown RBP15.64■□□□□ 0.09
PNKP-230ENST00000638016 P2RY6Q15077 328 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 PDK3Q15120 406 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 NCMAPQ5T1S8 102 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 GCNT6Q5T4J0 391 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 C9orf135Q5VTT2 229 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 ZNF440Q8IYI8 595 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 UBE2J2Q8N2K1 259 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 ZNF433Q8N7K0 673 aaPredicted RBP15.64■□□□□ 0.09
PNKP-230ENST00000638016 KBTBD8Q8NFY9 601 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 BBS10Q8TAM1 723 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 IGFBPL1Q8WX77 278 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 PMM1Q92871 262 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 APH1AQ96BI3 265 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 C3orf49Q96BT1 292 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms