RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PRAMEF9Q5VWM5 478 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 SLC38A6Q8IZM9 456 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 NKAIN3Q8N8D7 197 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 COQ3Q9NZJ6 369 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 OR6C68A6NDL8 312 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 TUSC2O75896 110 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 TMEM115Q12893 351 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 PPP1R8Q12972 351 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 ABHD15Q6UXT9 468 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 MFSD6LQ8IWD5 586 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 FEVQ99581 238 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 SUSD2Q9UGT4 822 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 MBD5Q9P267 1494 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 BMP2P12643 396 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 TPMTP51580 245 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 TECPR1Q7Z6L1 1165 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 CPNE4Q96A23 557 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 FKRPQ9H9S5 495 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 ZNF355PQ9NSJ1 428 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 SPHK1Q9NYA1 384 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 SPATA31A1Q5TZJ5 1347 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 MEIS3P2A8K0S8 358 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 ADAM23O75077 832 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 SOX3P41225 446 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 CPEB3Q8NE35 698 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 OR5B3Q8NH48 314 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 SLC41A2Q96JW4 573 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 VAMP8Q9BV40 100 aa18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 GMPR2Q9P2T1 348 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-257ENST00000638009 CCKARP32238 428 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 MEOX1P50221 254 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 CLDN8P56748 225 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 KLK6Q92876 244 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 HPGDSO60760 199 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 HSD17B1P14061 328 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 OR51L1Q8NGJ5 315 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 OR14J1Q9UGF5 321 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 ZNF281Q9Y2X9 895 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 G3V3Q6 166 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 FBP1P09467 338 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 TACR1P25103 407 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 CSNK1A1P48729 337 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 BIDP55957 195 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 TBCEQ15813 527 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 TEX261Q6UWH6 196 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 CDS1Q92903 461 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 HERPUD2Q9BSE4 406 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 U3KQ87 197 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 CBX7O95931 251 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 ACRV1P26436 265 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 LTBQ06643 244 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 EBPQ15125 230 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 OR4K13Q8NH42 304 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 TMEM43Q9BTV4 400 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 WDR18Q9BV38 432 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 TEX50A0A1B0GTY4 177 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 TAAR5O14804 337 aa18.18■□□□□ 0.5
CACNA1A-257ENST00000638009 H7BY64 318 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 ACKR3P25106 362 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 GRM7Q14831 915 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 ANKRD60Q9BZ19 345 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 VSX1Q9NZR4 365 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 TMX2-CTNND1H3BSU7 103 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 TMEM104Q8NE00 496 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 SH3RF2Q8TEC5 729 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 ACKR4Q9NPB9 350 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 CLCF1Q9UBD9 225 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 KPTNQ9Y664 436 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 CFAP20Q9Y6A4 193 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 SLC7A9P82251 487 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 STK11Q15831 433 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 GPR174Q9BXC1 333 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 SLC2A6Q9UGQ3 507 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 PIK3C2BO00750 1634 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 CLDN7O95471 211 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 ELAVL3Q14576 367 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 OR10Z1Q8NGY1 313 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 IFI44Q8TCB0 444 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 BORCS6Q96GS4 357 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 CRB3Q9BUF7 120 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 KCNK13Q9HB14 408 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 FAM208AQ9UK61 1670 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 HOXB5P09067 269 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 ITGAMP11215 1152 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 C1orf127Q8N9H9 656 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 BRCC3P46736 316 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 BPIFB3P59826 476 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 TMEM183BQ1AE95 376 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 OR4C11Q6IEV9 310 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 LRRC56Q8IYG6 542 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 KIRREL1Q96J84 757 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 HHIPL1Q96JK4 782 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 POLHQ9Y253 713 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 PLRG1O43660 514 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 SULT1C4O75897 302 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 S100A11P31949 105 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 LPAR4Q99677 370 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 SMIM3Q9BZL3 60 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms