RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SACM1LQ9NTJ5 587 aa13.94□□□□□ -0.18
CLN6-219ENST00000637329 MED17Q9NVC6 651 aa13.94□□□□□ -0.18
CLN6-219ENST00000637329 BAIAP2Q9UQB8 552 aa13.94□□□□□ -0.18
CLN6-219ENST00000637329 ZNF337Q9Y3M9 751 aa13.94□□□□□ -0.18
CLN6-219ENST00000637329 CPAMD8Q8IZJ3 1885 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 TRAV36DV7A0A075B6V5 113 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 SH3D21A4FU49 640 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 TRIM64CA6NLI5 447 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 MASP2O00187 686 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 SUSD5O60279 629 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 P04436 131 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 BMP7P18075 431 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 GABRB1P18505 474 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 PTNP21246 168 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 ADH6P28332 368 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 CYB561P49447 251 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 RPS4XP62701 263 aaKnown RBP13.93□□□□□ -0.18
CLN6-219ENST00000637329 CLN3Q13286 438 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 GINS1Q14691 196 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 PGGHGQ32M88 737 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 PLPPR5Q32ZL2 321 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 ZBED5Q49AG3 693 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 TMEM201Q5SNT2 666 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 SLC25A30Q5SVS4 291 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 PRAMEF20Q5VT98 475 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 B3GNTL1Q67FW5 361 aaPredicted RBP13.93□□□□□ -0.18
CLN6-219ENST00000637329 SLC46A3Q7Z3Q1 461 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 VASH2Q86V25 355 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 PLCZ1Q86YW0 608 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 TSPAN14Q8NG11 270 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 OR13C2Q8NGS9 318 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 CNIH3Q8TBE1 160 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 APH1BQ8WW43 257 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 ZBTB8AQ96BR9 441 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 C1GALT1C1Q96EU7 318 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 KLHDC3Q9BQ90 382 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 TSSK6Q9BXA6 273 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 ADNPQ9H2P0 1102 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 CCDC86Q9H6F5 360 aaKnown RBP13.93□□□□□ -0.18
CLN6-219ENST00000637329 FKRPQ9H9S5 495 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 CCNB1IP1Q9NPC3 277 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 MED11Q9P086 117 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
CLN6-219ENST00000637329 AHCTF1Q8WYP5 2266 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 HELZ2Q9BYK8 2649 aaKnown RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 A0A087WXM4 84 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 TRABD2BA6NFA1 517 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 ZNF891A8MT65 544 aaPredicted RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 A8MVM7 634 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 B4DXG7 233 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 GNB5O14775 395 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 ZNF208O43345 1280 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 GMFGO60234 142 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 MRPS14O60783 128 aaKnown RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 NPIPB7O75200 414 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 WBP4O75554 376 aaKnown RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 MT-ATP6P00846 226 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 IGFBP1P08833 259 aaPredicted RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 SLC6A6P31641 620 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 GRK5P34947 590 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 EIF1P41567 113 aaKnown RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 PCYT1AP49585 367 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 PRPS1P60891 318 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 EGR4Q05215 589 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 ZNF74Q16587 644 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 TMEM44Q2T9K0 475 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 ZNF468Q5VIY5 522 aaPredicted RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 TMEM236Q5W0B7 351 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 LAIR2Q6ISS4 152 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 PTCHD4Q6ZW05 846 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 MEX3DQ86XN8 651 aaKnown RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 GALNT16Q8N428 558 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 PSD4Q8NDX1 1056 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 ZNF524Q96C55 264 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 Q96MT0 163 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 RNF32Q9H0A6 362 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 TIMMDC1Q9NPL8 285 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 RASSF1Q9NS23 344 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 PLCXD1Q9NUJ7 323 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 SCN3BQ9NY72 215 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 ZNF226Q9NYT6 803 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 CHRNA9Q9UGM1 479 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 ZNF229Q9UJW7 825 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 POLHQ9Y253 713 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 TPRKBQ9Y3C4 175 aa13.92□□□□□ -0.18
CLN6-219ENST00000637329 SPIN1Q9Y657 262 aaPredicted RBP13.92□□□□□ -0.18
CLN6-219ENST00000637329 FREM2Q5SZK8 3169 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 IGSF10Q6WRI0 2623 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 FZD7O75084 574 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 PTP4A3O75365 173 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 TRIM3O75382 744 aaPredicted RBP13.91□□□□□ -0.18
CLN6-219ENST00000637329 NDUFB2O95178 105 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 HMGN1P05114 100 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 MASP1P48740 699 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 FXYD6P3P58550 94 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 CDC20Q12834 499 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 FOXF1Q12946 379 aa13.91□□□□□ -0.18
CLN6-219ENST00000637329 MFSD13AQ14CX5 517 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms