RNA–Protein interactions for RNA: ENST00000636168.1

CHRNA1-208, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA1, Length 1,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-208ENST00000636168 RIT1Q92963 219 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 DCLRE1CQ96SD1 692 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 SOSTQ9BQB4 213 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 FAIM2Q9BWQ8 316 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 ASPNQ9BXN1 380 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 EBPLQ9BY08 206 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 TIGARQ9NQ88 270 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 C12orf4Q9NQ89 552 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 MAT2BQ9NZL9 334 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 SH3BP4Q9P0V3 963 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 LRFN1Q9P244 771 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 CES1P1Q9UKY3 287 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 VPS4AQ9UN37 437 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 DLGAP4Q9Y2H0 992 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 NTNG1Q9Y2I2 539 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 LSM2Q9Y333 95 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 CMAHPQ9Y471 501 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 SVILO95425 2214 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 TMEM200CA6NKL6 621 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 MYO1GB0I1T2 1018 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 TFECO14948 347 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 HCN1O60741 890 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 TSPAN9O75954 239 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 SLC22A5O76082 557 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 OR7A10O76100 309 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 IGKV3-11P04433 115 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 ENPP1P22413 925 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 GALNSP34059 522 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 SLC9A3P48764 834 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 CYB561P49447 251 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 XKP51811 444 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 CLDN8P56748 225 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 RPL38P63173 70 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 RNF4P78317 190 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 ZNF267Q14586 743 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 LARS2Q15031 903 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 VMACQ2NL98 169 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 ZNF750Q32MQ0 723 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 ZNF766Q5HY98 468 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 C16orf47Q6ZP98 133 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 LAX1Q8IWV1 398 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 FAM9CQ8IZT9 166 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 HORMAD2Q8N7B1 307 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 CLDN22Q8N7P3 220 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 MDS2Q8NDY4 140 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 LRRC20Q8TCA0 184 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 TESCQ96BS2 214 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 ART5Q96L15 291 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 HYLS1Q96M11 299 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 OPALINQ96PE5 141 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 CNPPD1Q9BV87 410 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 HHATLQ9HCP6 504 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 MYOTQ9UBF9 498 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 SEC14L4Q9UDX3 406 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 ERVK-19Q9WJR5 959 aa11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 UBR5O95071 2799 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-208ENST00000636168 NPIPB8E9PQR5 432 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 AKR7A2O43488 359 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 ERAL1O75616 437 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 OR2J2O76002 312 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 NEURL1O76050 574 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 ZNF682O95780 498 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 IL3P08700 152 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 ANXA4P09525 319 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 CPMP14384 443 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 GPX2P18283 190 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 TRHRP34981 398 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 CRYBB2P43320 205 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 RIN1Q13671 783 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 VEZF1Q14119 521 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 TSTQ16762 297 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 TATDN3Q17R31 274 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 FAM180BQ6P0A1 224 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 LIX1Q8N485 282 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 OR8K3Q8NH51 312 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 GRHL3Q8TE85 626 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 C16orf78Q8WTQ4 265 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 OMA1Q96E52 524 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 OR5M11Q96RB7 305 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 MARVELD1Q9BSK0 173 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 SPATA9Q9BWV2 254 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 HDHD5Q9BXW7 423 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 MIXL1Q9H2W2 232 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 KLHL1Q9NR64 748 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 ING3Q9NXR8 418 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 POFUT2Q9Y2G5 429 aa11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 YARS2Q9Y2Z4 477 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-208ENST00000636168 WWP2O00308 870 aa11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 SLC43A1O75387 559 aa11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 IL1AP01583 271 aa11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 ANXA8P13928 327 aa11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 CD46P15529 392 aa11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 FEN1P39748 380 aaKnown RBP11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 SSR4P51571 173 aa11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 CLDN20P56880 219 aa11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 RRAS2P62070 204 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 ZNF763Q0D2J5 394 aa11.7□□□□□ -0.54
CHRNA1-208ENST00000636168 MAB21L1Q13394 359 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms