RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 LGALS12Q96DT0 336 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 SPACA9Q96E40 222 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 PRRC1Q96M27 445 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 ASNA1O43681 348 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 KRT33AO76009 404 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 PLGP00747 810 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 SFTPDP35247 375 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 GUCA1AP43080 201 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 PER3P56645 1201 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 ST3GAL4Q11206 333 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 ITGADQ13349 1161 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 EBPQ15125 230 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 PPP1R32Q7Z5V6 425 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 SNX29P2Q8IUI4 249 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 SHISA5Q8N114 240 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 NXF2Q9GZY0 626 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 KCNE3Q9Y6H6 103 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 FUOMA2VDF0 154 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 ABCD3P28288 659 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 GINS1Q14691 196 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR1C1Q15619 314 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 MRPL2Q5T653 305 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 MRPL14Q6P1L8 145 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 GALNTL5Q7Z4T8 443 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR4K5Q8NGD3 323 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 ARSGQ96EG1 525 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 TMEM80Q96HE8 168 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 DSN1Q9H410 356 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 SPTAN1Q13813 2472 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 H3BML4 177 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 TPD52L2O43399 206 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 CHMP24386 653 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 PTGES3Q15185 160 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC27A4Q6P1M0 643 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 TMPRSS11AQ6ZMR5 421 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 RTL4Q6ZR62 310 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 LACC1Q8IV20 430 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 M1APQ8TC57 530 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 EXTL1Q92935 676 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 SGCZQ96LD1 299 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 NEURL2Q9BR09 285 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 MESP1Q9BRJ9 268 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 MROQ9BYG7 248 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 MED11Q9P086 117 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 SPIN1Q9Y657 262 aaPredicted RBP11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 FRG2CA6NGY1 282 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 MCIDASD6RGH6 385 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF264O43296 627 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 ICOSLGO75144 302 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 AHSA1O95433 338 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 DLGAP3O95886 979 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 OCM2P0CE71 109 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 OCMP0CE72 109 aaPredicted RBP11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 NUDT6P53370 316 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 ARMCX4Q5H9R4 360 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF554Q86TJ5 538 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 TRIM2Q9C040 744 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 BCL2L10Q9HD36 194 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 CNOT2Q9NZN8 540 aaKnown RBP11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC35A3Q9Y2D2 325 aa11.41□□□□□ -0.58
SYNGAP1-207ENST00000628646 TRBV4-1A0A0J9YWV2 114 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 SERINC4A6NH21 518 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 PPM1BO75688 479 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 PTHP01270 115 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 ADORA3P0DMS8 318 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 SRSF6Q13247 344 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 JMJD6Q6NYC1 403 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 UNQ6494/PRO21346Q6UXR6 183 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 NUP54Q7Z3B4 507 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC46A3Q7Z3Q1 461 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 SPACA3Q8IXA5 215 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 TCEANCQ8N8B7 351 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC25A19Q9HC21 320 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 DAPK2Q9UIK4 370 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 PEX16Q9Y5Y5 336 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 IGHV1-45A0A0A0MS14 117 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 VSTM2BA6NLU5 285 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 DNASE1L1P49184 302 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC37A1P57057 533 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 C17orf67Q0P5P2 114 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 FUT5Q11128 374 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 RPL13AP3Q6NVV1 102 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 RBM45Q8IUH3 476 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF440Q8IYI8 595 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR10G3Q8NGC4 313 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 HS6ST2Q96MM7 605 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 MND1Q9BWT6 205 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 POLR2J2Q9GZM3 115 aaKnown RBP11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 TAS2R10Q9NYW0 307 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF443Q9Y2A4 671 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 KLF13Q9Y2Y9 288 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 TLX2O43763 284 aaPredicted RBP11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 UGT2B10P36537 528 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 EMDP50402 254 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 IL10RAQ13651 578 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 RASL10BQ96S79 203 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 DPH1Q9BZG8 443 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 MED31Q9Y3C7 131 aa11.4□□□□□ -0.58
SYNGAP1-207ENST00000628646 MYO15AQ9UKN7 3530 aa11.4□□□□□ -0.59
SYNGAP1-207ENST00000628646 RIIAD1A6NNX1 92 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms