RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OR5M3Q8NGP4 307 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 RHOXF1Q8NHV9 184 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 NACC2Q96BF6 587 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 C3orf49Q96BT1 292 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 SH3YL1Q96HL8 342 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 TUBA8Q9NY65 449 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 ICAM5Q9UMF0 924 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 TMEM5Q9Y2B1 443 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 COL12A1Q99715 3063 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 MED13Q9UHV7 2174 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 IGKV1D-42A0A075B6H8 117 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 KPNA4O00629 521 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 MPZL2O60487 215 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 CEACAM4O75871 244 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 CCDC159P0C7I6 412 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 IFI30P13284 250 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 PTGDSP41222 190 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 ST13P50502 369 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 HLCSP50747 726 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 CCL11P51671 97 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 RRADP55042 308 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 CXCR4P61073 352 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 TUBA4AP68366 448 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 PRKCDQ05655 676 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 IL10RAQ13651 578 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 TOMM34Q15785 309 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 BICRALQ6AI39 1079 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 ACSM5Q6NUN0 579 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 CASP12Q6UXS9 341 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 NUP54Q7Z3B4 507 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 BPIFB6Q8NFQ5 453 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF563Q8TA94 476 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 TEX47Q8TBZ9 253 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 SIGLEC11Q96RL6 698 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 RASL10BQ96S79 203 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 ENKD1Q9H0I2 346 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF160Q9HCG1 818 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 SCN3BQ9NY72 215 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 IL20Q9NYY1 176 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 TEX15Q9BXT5 2789 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 A0A087WUJ7 227 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 NUDT14O95848 222 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 PDGFAP04085 211 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 FBXO45P0C2W1 286 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 PNMTP11086 282 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 ICAM2P13598 275 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 PGCP20142 388 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 RPL5P46777 297 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 GIPRP48546 466 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 SMSP52788 366 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 CTBP2P56545 445 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 GABARAPL2P60520 117 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC35A2P78381 396 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 PIGFQ07326 219 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF620Q6ZNG0 422 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 TMPRSS11FQ6ZWK6 438 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 MRGPREQ86SM8 312 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 ATG4DQ86TL0 474 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 ARMC10Q8N2F6 343 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 OSTF1Q92882 214 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 BPIFA2Q96DR5 249 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 DUSP21Q9H596 190 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 GALNT9Q9HCQ5 603 aa8.63□□□□□ -1.03
PDLIM5-223ENST00000627587 NCKAP5O14513 1909 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ARGFXA6NJG6 315 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ELOA3DA6NLF2 546 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 GNB5O14775 395 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ITGA10O75578 1167 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 HPP00738 406 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ADRA2AP08913 450 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SAGP10523 405 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC1A3P43003 542 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 UQCRFS1P47985 274 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ALDH3B2P48448 385 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 P2RX1P51575 399 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 GTF2A1P52655 376 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 NR1H2P55055 460 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 CSNK2BP67870 215 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TEKQ02763 1124 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 EGR4Q05215 589 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 CRYZQ08257 329 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 CBFBQ13951 182 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 GINS1Q14691 196 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 INPP5JQ15735 1006 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 NTRK2Q16620 822 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF791Q3KP31 576 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ELOA3BQ3SY89 546 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 NADK2Q4G0N4 442 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 XAF1Q6GPH4 301 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC27A4Q6P1M0 643 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 PTCHD4Q6ZW05 846 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SATL1Q86VE3 508 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 CLDN22Q8N7P3 220 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ELOA3Q8NG57 546 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 OR10G3Q8NGC4 313 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 OR4Q3Q8NH05 313 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 OR5W2Q8NH69 310 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 DUSP19Q8WTR2 217 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TRUB1Q8WWH5 349 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms