RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TACC2O95359 2948 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 TRAPPC13A5PLN9 417 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 AHRRA9YTQ3 701 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 PRSS44E7EML9 344 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 H0YC42 278 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 TNFSF11O14788 317 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 EFNA2O43921 213 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 TPST2O60704 377 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 HOXD4P09016 255 aaPredicted RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 PNMTP11086 282 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 FKBP2P26885 142 aaKnown RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 IFNA8P32881 189 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 EIF1AXP47813 144 aaKnown RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 MAP2K6P52564 334 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 SMSP52788 366 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 SUCLG1P53597 346 aaKnown RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 TPD52P55327 224 aaPredicted RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 MS4A2Q01362 244 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 FLOT2Q14254 428 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 ACSF3Q4G176 576 aaPredicted RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 SWT1Q5T5J6 900 aaKnown RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 C1orf185Q5T7R7 199 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 RTL6Q6ICC9 239 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 ULK3Q6PHR2 472 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 ADGRG3Q86Y34 549 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 FAM86B1Q8N7N1 296 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 ADAMTS16Q8TE57 1224 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 DDIT4LQ96D03 193 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 PYURFQ96I23 114 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 OR5B2Q96R09 309 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 TUBA1CQ9BQE3 449 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 POLR2J2Q9GZM3 115 aaKnown RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 POLR2J3Q9H1A7 115 aaKnown RBP13.22□□□□□ -0.29
PNKP-221ENST00000627317 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 MYO7BQ6PIF6 2116 aa13.22□□□□□ -0.29
PNKP-221ENST00000627317 A0A0B4J2E0 115 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 A0A0J9YW62 118 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 A0A1B0GX12 115 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 TMEM72A0PK05 275 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 ZNF208O43345 1280 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 OR5F1O95221 314 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 CDH12P55289 794 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 SGCBQ16585 318 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 PPP4R4Q6NUP7 873 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 B3GNT6Q6ZMB0 384 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 CYP4Z1Q86W10 505 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 OR10D3Q8NH80 312 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 ZPLD1Q8TCW7 415 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 POP5Q969H6 163 aaKnown RBP13.21□□□□□ -0.29
PNKP-221ENST00000627317 SLC41A3Q96GZ6 507 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 PRRC1Q96M27 445 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 TRIB1Q96RU8 372 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 AMBRA1Q9C0C7 1298 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 OR11A1Q9GZK7 315 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 TIGARQ9NQ88 270 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 PAQR5Q9NXK6 330 aaPredicted RBP13.21□□□□□ -0.29
PNKP-221ENST00000627317 SLC7A8Q9UHI5 535 aa13.21□□□□□ -0.29
PNKP-221ENST00000627317 A0A1W2PNR3 127 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 CLCA1A8K7I4 914 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 A8MVM7 634 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 C19orf84I3L1E1 186 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 ACOT8O14734 319 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 ADAMDEC1O15204 470 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 CHP2O43745 196 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 CXCL13O43927 109 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 CIB2O75838 187 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 SYNGR4O95473 234 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 CLDN14O95500 239 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 PRF1P14222 555 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 CLK1P49759 484 aaKnown RBP13.2□□□□□ -0.3
PNKP-221ENST00000627317 CLDN15P56746 228 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 CTU2Q2VPK5 515 aaKnown RBP13.2□□□□□ -0.3
PNKP-221ENST00000627317 SP5Q6BEB4 398 aaPredicted RBP13.2□□□□□ -0.3
PNKP-221ENST00000627317 ASRGL1Q7L266 308 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 TSPYL5Q86VY4 417 aaPredicted RBP13.2□□□□□ -0.3
PNKP-221ENST00000627317 SLC38A4Q969I6 547 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 ADGRG7Q96K78 797 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 COQ10BQ9H8M1 238 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 RIMS3Q9UJD0 308 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 SLC7A7Q9UM01 511 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 POMPQ9Y244 141 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 HDGFL3Q9Y3E1 203 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 FAM32AQ9Y421 112 aaKnown RBP13.2□□□□□ -0.3
PNKP-221ENST00000627317 ENPP4Q9Y6X5 453 aa13.2□□□□□ -0.3
PNKP-221ENST00000627317 PCNX1Q96RV3 2341 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 A0A087WUJ7 227 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 TCRBV5S2A0A599 114 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 CD8B2A6NJW9 211 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 SLC22A20A6NK97 555 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 AQP12BA6NM10 295 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 hCG_2039718K7EN88 272 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 SULT2B1O00204 365 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 AHSA1O95433 338 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 ITGA2P17301 1181 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 YAP1P46937 504 aaKnown RBP13.19□□□□□ -0.3
PNKP-221ENST00000627317 CARD18P57730 90 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 NUP107P57740 925 aa13.19□□□□□ -0.3
PNKP-221ENST00000627317 CSNK2A1P68400 391 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms