RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 TDGF1P3P51864 188 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 CLDN20P56880 219 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 SMIM11AP58511 58 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 RAC1P63000 192 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 SRYQ05066 204 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 CRYZQ08257 329 aaKnown RBP7.67□□□□□ -1.18
SGMS1-211ENST00000626236 PPP1R8Q12972 351 aaKnown RBP7.67□□□□□ -1.18
SGMS1-211ENST00000626236 DGCR6Q14129 220 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 ATP6AP1Q15904 470 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 C3AR1Q16581 482 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 EXOC3L2Q2M3D2 409 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 TMEM176BQ3YBM2 270 aaPredicted RBP7.67□□□□□ -1.18
SGMS1-211ENST00000626236 KRTCAP3Q53RY4 240 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 SYT14P1Q58G82 188 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 NHSL2Q5HYW2 709 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 VASNQ6EMK4 673 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 ARHGAP11AQ6P4F7 1023 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 PODNL1Q6PEZ8 512 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 LINC00114Q6XXX2 140 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 ZNF730Q6ZMV8 503 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 AMIGO2Q86SJ2 522 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 GHDCQ8N2G8 530 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 SLC7A13Q8TCU3 470 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 SLC25A43Q8WUT9 341 aaPredicted RBP7.67□□□□□ -1.18
SGMS1-211ENST00000626236 TMEM239Q8WW34 195 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 DHRS1Q96LJ7 313 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 OR5B2Q96R09 309 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 SLX1AQ9BQ83 275 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 OR11A1Q9GZK7 315 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 ANKRD19PQ9H560 264 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 REEP1Q9H902 201 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 STOML1Q9UBI4 398 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 DNAJB9Q9UBS3 223 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 TMCC3Q9ULS5 477 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 CAMK2AQ9UQM7 478 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 RRP15Q9Y3B9 282 aaKnown RBP7.67□□□□□ -1.18
SGMS1-211ENST00000626236 SAMHD1Q9Y3Z3 626 aaKnown RBP7.67□□□□□ -1.18
SGMS1-211ENST00000626236 LYVE1Q9Y5Y7 322 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 U3KQV3 271 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 ATRXP46100 2492 aa7.67□□□□□ -1.18
SGMS1-211ENST00000626236 KALRNO60229 2985 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 ZNF407Q9C0G0 2248 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 IGKV1D-42A0A075B6H8 117 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 A0A1W2PNR3 127 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 NPIPA2E9PIF3 369 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 NPIPA3F8WFD2 350 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 H0YC42 278 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 EIF1AYO14602 144 aaKnown RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 TNFSF11O14788 317 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 E2F6O75461 281 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 BAG2O95816 211 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 LDLRP01130 860 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 PRB1P04280 392 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 EDN3P14138 238 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 ZNF708P17019 499 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 FKBP2P26885 142 aaKnown RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 RBM34P42696 430 aaKnown RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 RPS5P46782 204 aaKnown RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 MAP2K6P52564 334 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 SUCLG1P53597 346 aaKnown RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 IST1P53990 364 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 UGT2B15P54855 530 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 TPD52P55327 224 aaPredicted RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 CLDN18P56856 261 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 EGR4Q05215 589 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 C19orf57Q0VDD7 668 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 LAPTM4AQ15012 233 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 RCN1Q15293 331 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 SEC23BQ15437 767 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 C1orf140Q5VVS0 124 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 HMBOX1Q6NT76 420 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 TBPL2Q6SJ96 375 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 GFRALQ6UXV0 394 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 RRM2BQ7LG56 351 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 FGD2Q7Z6J4 655 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 GGNQ86UU5 652 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 MEIOBQ8N635 442 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 C10orf53Q8N6V4 93 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 PFN4Q8NHR9 129 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 STK35Q8TDR2 534 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 ACOT11Q8WXI4 607 aaPredicted RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 SARAFQ96BY9 339 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 KTI12Q96EK9 354 aaPredicted RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 ARL5BQ96KC2 179 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 KLHL15Q96M94 604 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 HS6ST2Q96MM7 605 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 ALPK1Q96QP1 1244 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 EPYCQ99645 322 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 TIMP4Q99727 224 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 BARD1Q99728 777 aaKnown RBP7.66□□□□□ -1.18
SGMS1-211ENST00000626236 PKP2Q99959 881 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 TMEM43Q9BTV4 400 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 BDH2Q9BUT1 245 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 ZNF426Q9BUY5 554 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 SEMA6AQ9H2E6 1030 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 MED31Q9Y3C7 131 aa7.66□□□□□ -1.18
SGMS1-211ENST00000626236 TRAV36DV7A0A075B6V5 113 aa7.65□□□□□ -1.18
SGMS1-211ENST00000626236 A0A087WUU8 490 aa7.65□□□□□ -1.18
SGMS1-211ENST00000626236 A0A0J9YW62 118 aa7.65□□□□□ -1.18
SGMS1-211ENST00000626236 SH3PXD2BA1X283 911 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms