RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SDHAP31040 664 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 VIPR2P41587 438 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 FRKP42685 505 aaPredicted RBP11.52□□□□□ -0.56
LITAF-221ENST00000622633 GIPRP48546 466 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 VASPP50552 380 aaPredicted RBP11.52□□□□□ -0.56
LITAF-221ENST00000622633 RAB2AP61019 212 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 MAP4K2Q12851 820 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 ILF3Q12906 894 aaKnown RBP eCLIP11.52□□□□□ -0.56
LITAF-221ENST00000622633 MLLT11Q13015 90 aaPredicted RBP11.52□□□□□ -0.56
LITAF-221ENST00000622633 C1DQ13901 141 aaKnown RBP11.52□□□□□ -0.56
LITAF-221ENST00000622633 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.56
LITAF-221ENST00000622633 SYT14P1Q58G82 188 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 PYY3Q5JQD4 70 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 ATAT1Q5SQI0 421 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 RPL13AP3Q6NVV1 102 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 METAP1DQ6UB28 335 aaPredicted RBP11.52□□□□□ -0.56
LITAF-221ENST00000622633 ADCK2Q7Z695 626 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 IQCHQ86VS3 1027 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 FAM26EQ8N5C1 309 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 OR6T1Q8NGN1 323 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 OR9Q1Q8NGQ5 310 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 WFIKKN2Q8TEU8 576 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 TCTEX1D2Q8WW35 142 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 KAT2AQ92830 837 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 WNT2BQ93097 391 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 RSPRY1Q96DX4 576 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 SLC35G5Q96KT7 338 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 ZNF582Q96NG8 517 aaPredicted RBP11.52□□□□□ -0.56
LITAF-221ENST00000622633 MACROD1Q9BQ69 325 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 TAS2R3Q9NYW6 316 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 COMMD3Q9UBI1 195 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 P2RX2Q9UBL9 471 aa11.52□□□□□ -0.56
LITAF-221ENST00000622633 YARS2Q9Y2Z4 477 aaKnown RBP11.52□□□□□ -0.56
LITAF-221ENST00000622633 LRRK1Q38SD2 2015 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 A0A1W2PPV9 198 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 ACOD1A6NK06 481 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 COLCA2A8K830 154 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 LDLRAD4O15165 306 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 LANCL1O43813 399 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 RAB3DO95716 219 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 EPPINO95925 133 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 SERPINA3P01011 423 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 PCCBP05166 539 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 CTBP2P56545 445 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 PPP3R1P63098 170 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 REEP5Q00765 189 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 TMEM255AQ5JRV8 349 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 C22orf42Q6IC83 251 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 ZNF248Q8NDW4 579 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 OR5K2Q8NHB8 316 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 HSD17B8Q92506 261 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 ZNF559Q9BR84 538 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 MAN2C1Q9NTJ4 1040 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 ZCCHC3Q9NUD5 404 aaKnown RBP11.52□□□□□ -0.57
LITAF-221ENST00000622633 TXNL4BQ9NX01 149 aaKnown RBP11.52□□□□□ -0.57
LITAF-221ENST00000622633 OR6C2Q9NZP2 312 aa11.52□□□□□ -0.57
LITAF-221ENST00000622633 CKAP5Q14008 2032 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 RP2O75695 350 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 SAGP10523 405 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 ERGP11308 486 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 SDC2P34741 201 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 BUD31P41223 144 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 EVX1P49640 407 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 ALG11Q2TAA5 492 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 ZNF750Q32MQ0 723 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 OR2G6Q5TZ20 316 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 OR4C11Q6IEV9 310 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 CXorf40AQ8TE69 158 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 AMDHD1Q96NU7 426 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 MENTQ9BUN1 341 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 POLDIP3Q9BY77 421 aaKnown RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 FN3KQ9H479 309 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 BARX1Q9HBU1 254 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 FAM212BQ9NTI7 297 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 KLHL9Q9P2J3 617 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 FBXW2Q9UKT8 454 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 PLEKHA6Q9Y2H5 1048 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 SPIN1Q9Y657 262 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 TCF20Q9UGU0 1960 aaKnown RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 KHDRBS3O75525 346 aaKnown RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 RAB36O95755 333 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 CHRM4P08173 479 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 DRD2P14416 443 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 NFYAP23511 347 aaPredicted RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 RGS19P49795 217 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 PPT1P50897 306 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 CCR9P51686 369 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 NCBP2P52298 156 aaKnown RBP eCLIP11.51□□□□□ -0.57
LITAF-221ENST00000622633 ELAVL3Q14576 367 aaKnown RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 GSG1Q2KHT4 349 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 KRBOX4Q5JUW0 171 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 ZNF730Q6ZMV8 503 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 ASB18Q6ZVZ8 466 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 ERN2Q76MJ5 926 aaKnown RBP11.51□□□□□ -0.57
LITAF-221ENST00000622633 CACUL1Q86Y37 369 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 ARMC10Q8N2F6 343 aa11.51□□□□□ -0.57
LITAF-221ENST00000622633 SLC44A3Q8N4M1 653 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms