RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SEMA6CQ9H3T2 930 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 MKKSQ9NPJ1 570 aaPredicted RBP8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 MCUBQ9NWR8 336 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 HRASLS2Q9NWW9 162 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 PTTG3PQ9NZH4 202 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 COPZ2Q9P299 210 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 NCDNQ9UBB6 729 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 RPS6KB2Q9UBS0 482 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 FBXL4Q9UKA2 621 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 RNF215Q9Y6U7 377 aa8.84□□□□□ -0.99
IGHV3-54-201ENST00000622166 A0A087WUJ7 227 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 A0A0A6YYJ9 748 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 OR5K3A6NET4 321 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 LRRN3E7EW58 273 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 FLRT2O43155 660 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 EEF1E1O43324 174 aaKnown RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 CTNSO60931 367 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 RDH16O75452 317 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 OR2B3O76000 313 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 OR7A10O76100 309 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 RNH1P13489 461 aaKnown RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 HIST1H1CP16403 213 aaKnown RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 ATF1P18846 271 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 DRD1P21728 446 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 RABIFP47224 123 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 TPMTP51580 245 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 CCR5P51681 352 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 RPS11P62280 158 aaKnown RBP eCLIP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 SIRPAP78324 504 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 CRYZQ08257 329 aaKnown RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 C19orf57Q0VDD7 668 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 DYRK1AQ13627 763 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 HTR4Q13639 388 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 FCN2Q15485 313 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 BTBD16Q32M84 506 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 CD276Q5ZPR3 534 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 KIAA1324Q6UXG2 1013 aaKnown RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 NPSR1Q6W5P4 371 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 RPTNQ6XPR3 784 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 Q6ZSR6 202 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 ASB18Q6ZVZ8 466 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 UTS2BQ765I0 119 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 OOSP2Q86WS3 158 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 ZNF595Q8IYB9 648 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 DNAJC5GQ8N7S2 189 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 FAM98AQ8NCA5 519 aaKnown RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 SLC37A2Q8TED4 501 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 PATE1Q8WXA2 126 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 ADAMTS14Q8WXS8 1223 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 THAP4Q8WY91 577 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 TTC9Q92623 222 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 ZMYND19Q96E35 227 aaPredicted RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 ZNF578Q96N58 590 aaPredicted RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 GPX7Q96SL4 187 aaPredicted RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 G6PC3Q9BUM1 346 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 SLC19A3Q9BZV2 496 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 MED28Q9H204 178 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 LRRN3Q9H3W5 708 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 PLEKHA1Q9HB21 404 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 CD93Q9NPY3 652 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 NRIP3Q9NQ35 241 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 POMT2Q9UKY4 750 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 SPATA2Q9UM82 520 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 PCDHGA9Q9Y5G4 932 aaKnown RBP8.83□□□□□ -1
IGHV3-54-201ENST00000622166 IER3IP1Q9Y5U9 82 aa8.83□□□□□ -1
IGHV3-54-201ENST00000622166 CACNA1IQ9P0X4 2223 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 A0A1W2PRG6 482 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 SERINC4A6NH21 518 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 EPOPA6NHQ4 379 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 MCIDASD6RGH6 385 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 TGFBR3LH3BV60 316 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 IMPA2O14732 288 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 PDCD5O14737 125 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 PRAMEF2O60811 474 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 CPNE3O75131 537 aaKnown RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 TCRBP04435 133 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 GYPBP06028 91 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 SNRPBP14678 240 aaKnown RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 TYRP1P17643 537 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 GALNSP34059 522 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 EVI2BP34910 448 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 SLC25A1P53007 311 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 RPS4XP62701 263 aaKnown RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 EIF2B5Q13144 721 aaKnown RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 KLF9Q13886 244 aaPredicted RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 PON3Q15166 354 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 ANGPT1Q15389 498 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 C9orf50Q5SZB4 431 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 ZNF684Q5T5D7 378 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 COL13A1Q5TAT6 717 aaPredicted RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 ARMC6Q6NXE6 501 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 ZC3H14Q6PJT7 736 aaKnown RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 BTN2A1Q7KYR7 527 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 MCATQ8IVS2 390 aaKnown RBP8.82□□□□□ -1
IGHV3-54-201ENST00000622166 SIAH3Q8IW03 269 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 C9orf62Q8N4C0 152 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 ARL14Q8N4G2 192 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 LRRC17Q8N6Y2 441 aa8.82□□□□□ -1
IGHV3-54-201ENST00000622166 NPEPL1Q8NDH3 523 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms