RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 EEF1A1P68104 462 aaKnown RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 PLGLB1Q02325 96 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 MGAT2Q10469 447 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 IL11RAQ14626 422 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 SGCBQ16585 318 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 RPS19BP1Q86WX3 136 aaKnown RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 C7orf57Q8NEG2 295 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 ADAD1Q96M93 576 aaKnown RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 NMNAT3Q96T66 252 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.41□□□□□ -0.17e-9■■■■□ 19.6
CPSF1-213ENST00000620219 CENPMQ9NSP4 180 aa14.41□□□□□ -0.1
CPSF1-213ENST00000620219 DNAJB12Q9NXW2 375 aaKnown RBP14.41□□□□□ -0.1
CPSF1-213ENST00000620219 TCRBV16S1A1N1A0A5B0 115 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 TOX3O15405 576 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 CASRP41180 1078 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 TAF13Q15543 124 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 SLC23A3Q6PIS1 610 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 NAXDQ8IW45 347 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 BBS1Q8NFJ9 593 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 NLGN4YQ8NFZ3 816 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 HMG20AQ9NP66 347 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 MAN2C1Q9NTJ4 1040 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 FRG2CA6NGY1 282 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 EIF1AYO14602 144 aaKnown RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 SUSD5O60279 629 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 EVI2BP34910 448 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 TMEM44Q2T9K0 475 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 ARHGAP11AQ6P4F7 1023 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF620Q6ZNG0 422 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 ACBD7Q8N6N7 88 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF433Q8N7K0 673 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF582Q96NG8 517 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 LMF2Q9BU23 707 aaKnown RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 OCEL1Q9H607 264 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 DAPK2Q9UIK4 370 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 CDV3Q9UKY7 258 aaKnown RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 TEX13CA0A0J9YWL9 993 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 CCRL2O00421 344 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 KRT33AO76009 404 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 IL33O95760 270 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 PSMD7P51665 324 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 TRIM16LQ309B1 348 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 RPL13AP3Q6NVV1 102 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 MAMDC2Q7Z304 686 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 C9orf40Q8IXQ3 194 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 RNF113BQ8IZP6 322 aaKnown RBP14.4□□□□□ -0.1
CPSF1-213ENST00000620219 RASD2Q96D21 266 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 HDHD5Q9BXW7 423 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 KCND3Q9UK17 655 aa14.4□□□□□ -0.1
CPSF1-213ENST00000620219 NBASA2RRP1 2371 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 SNX4O95219 450 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 DLSTP36957 453 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 FOXK2Q01167 660 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 SYT14P1Q58G82 188 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 SPANXN2Q5MJ10 180 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 ABHD17BQ5VST6 288 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 GIMD1P0DJR0 217 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 FGFBP1Q14512 234 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 ZSWIM7Q19AV6 140 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 CHMP1BQ7LBR1 199 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-213ENST00000620219 GID4Q8IVV7 300 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 SLC15A4Q8N697 577 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 Q96M85 177 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 CENPOQ9BU64 300 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 ABCB9Q9NP78 766 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 MRPS7Q9Y2R9 242 aaKnown RBP14.39□□□□□ -0.11
CPSF1-213ENST00000620219 TMED7-TICAM2A0A0A6YYA0 188 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 SPAARA0A1B0GVQ0 90 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 ITGA10O75578 1167 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 RFPL3O75679 317 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 MT-CO3P00414 261 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 PRKCAP17252 672 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 OPRL1P41146 370 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 BMXP51813 675 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 E2F1Q01094 437 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 SNTA1Q13424 505 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 GLYR1Q49A26 553 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-213ENST00000620219 C17orf82Q86X59 251 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-213ENST00000620219 ESX1Q8N693 406 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 OR8D4Q8NGM9 314 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 ZFAND2BQ8WV99 257 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 TMED7Q9Y3B3 224 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 RTTNQ86VV8 2226 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 OIP5O43482 229 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 TLE3Q04726 772 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 TOMM34Q15785 309 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-213ENST00000620219 FHL5Q5TD97 284 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 HINT3Q9NQE9 182 aaKnown RBP14.39□□□□□ -0.11
CPSF1-213ENST00000620219 PRMT8Q9NR22 394 aaPredicted RBP14.39□□□□□ -0.11
CPSF1-213ENST00000620219 REV1Q9UBZ9 1251 aa14.39□□□□□ -0.11
CPSF1-213ENST00000620219 A0A1W2PRG6 482 aa14.38□□□□□ -0.11
CPSF1-213ENST00000620219 AKAP8O43823 692 aaKnown RBP14.38□□□□□ -0.11
CPSF1-213ENST00000620219 CELA2AP08217 269 aa14.38□□□□□ -0.11
CPSF1-213ENST00000620219 C17orf67Q0P5P2 114 aa14.38□□□□□ -0.11
CPSF1-213ENST00000620219 HES3Q5TGS1 186 aa14.38□□□□□ -0.11
CPSF1-213ENST00000620219 LCN1P1Q5VSP4 162 aa14.38□□□□□ -0.11
CPSF1-213ENST00000620219 MARCH9Q86YJ5 346 aa14.38□□□□□ -0.11
CPSF1-213ENST00000620219 CTHRC1Q96CG8 243 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms