RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 DCTN4Q9UJW0 460 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 CENPVL1A0A0U1RR11 272 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 TMEM247A6NEH6 219 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 CFAP73A6NFT4 308 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 SHISA9B4DS77 424 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 C9JVG2 144 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 HMGN4O00479 90 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 CRLF1O75462 422 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 IL6P05231 212 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 PGRP06401 933 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 NR2F1P10589 423 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 IDH2P48735 452 aaKnown RBP10.51□□□□□ -0.73
UPF3B-204ENST00000619445 OR2B6P58173 313 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 PHC1P78364 1004 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 H3F3AP84243 136 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 CHRNEQ04844 493 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 FAPQ12884 760 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 HHATQ5VTY9 493 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 ZNF544Q6NX49 715 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 SLC22A25Q6T423 547 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 PAQR6Q6TCH4 344 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 RNF130Q86XS8 419 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 ADGRG3Q86Y34 549 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 PEX5LQ8IYB4 626 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 FBXL14Q8N1E6 418 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 CLEC4FQ8N1N0 589 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 WDR60Q8WVS4 1066 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 ZNF775Q96BV0 537 aaPredicted RBP10.51□□□□□ -0.73
UPF3B-204ENST00000619445 ZNF524Q96C55 264 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 MUS81Q96NY9 551 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 OR52E6Q96RD3 313 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 SORT1Q99523 831 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 DHRS9Q9BPW9 319 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 SF3B5Q9BWJ5 86 aaKnown RBP10.51□□□□□ -0.73
UPF3B-204ENST00000619445 FKRPQ9H9S5 495 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 MOV10Q9HCE1 1003 aaKnown RBP10.51□□□□□ -0.73
UPF3B-204ENST00000619445 KCNK9Q9NPC2 374 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 CBLN4Q9NTU7 201 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 AIG1Q9NVV5 245 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 UPB1Q9UBR1 384 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 POU2F3Q9UKI9 436 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 AMDHD2Q9Y303 409 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 STAB1Q9NY15 2570 aa10.51□□□□□ -0.73
UPF3B-204ENST00000619445 MXRA5Q9NR99 2828 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 ALPK2Q86TB3 2170 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 A0A096LPI6 279 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 TMED7-TICAM2A0A0A6YYA0 188 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 OR6C65A6NJZ3 312 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 RNF223E7ERA6 249 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 HDAC3O15379 428 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 RAD51DO75771 328 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 VAMP5O95183 116 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 WNT11O96014 354 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 IFNA2P01563 188 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 GPIP06744 558 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 IDO1P14902 403 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 TTKP33981 857 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 CDKN1AP38936 164 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 CASP9P55211 416 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 COPZ1P61923 177 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 FUT5Q11128 374 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 KLHL24Q6TFL4 600 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 CLEC2AQ6UVW9 174 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 CASP12Q6UXS9 341 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 DNM1P46Q6ZS02 220 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 ZNF621Q6ZSS3 439 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 MSANTD1Q6ZTZ1 278 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 POMGNT2Q8NAT1 580 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 ARL5BQ96KC2 179 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 AMBRA1Q9C0C7 1298 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 SLC38A1Q9H2H9 487 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 CENPHQ9H3R5 247 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 OBP2BQ9NPH6 170 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 THAP1Q9NVV9 213 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 P2RX2Q9UBL9 471 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 TMED7Q9Y3B3 224 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 SLC25A15Q9Y619 301 aa10.5□□□□□ -0.73
UPF3B-204ENST00000619445 CR1P17927 2039 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 RFXANKO14593 260 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 CD5LO43866 347 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 RAMP1O60894 148 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 CD8AP01732 235 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 IGHV4-39P01824 125 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 CSF3P09919 207 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 BGNP21810 368 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 RPS4Y1P22090 263 aaKnown RBP10.49□□□□□ -0.73
UPF3B-204ENST00000619445 CXCR1P25024 350 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 CD40P25942 277 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 ACVR1BP36896 505 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 NUDT6P53370 316 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 CRISP3P54108 245 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 CHRNB3Q05901 458 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 BST1Q10588 318 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 SLC17A1Q14916 467 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 RAB35Q15286 201 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 GABRA6Q16445 453 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 LIN52Q52LA3 116 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 TNFAIP8L3Q5GJ75 292 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 CEP85LQ5SZL2 805 aa10.49□□□□□ -0.73
UPF3B-204ENST00000619445 ATG16L1Q676U5 607 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms