RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GPR151Q8TDV0 419 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 GIPC3Q8TF64 312 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 RASSF5Q8WWW0 418 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 DIO2Q92813 273 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PMM1Q92871 262 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 MUL1Q969V5 352 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ARSGQ96EG1 525 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 SH3YL1Q96HL8 342 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 TMEM41AQ96HV5 264 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 SLC35G5Q96KT7 338 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ZFP3Q96NJ6 502 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PANX1Q96RD7 426 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 STACQ99469 402 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 SDF2Q99470 211 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PSD2Q9BQI7 771 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CPPED1Q9BRF8 314 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 BTBD2Q9BX70 525 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ANGPTL4Q9BY76 406 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 MROQ9BYG7 248 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PIGUQ9H490 435 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 TOR3AQ9H497 397 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 REEP1Q9H902 201 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 TPT1P8Q9HAU6 139 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 SDHAF3Q9NRP4 125 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 DUSP22Q9NRW4 184 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PAK1IP1Q9NWT1 392 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PAQR5Q9NXK6 330 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 VAPAQ9P0L0 249 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PLEKHB1Q9UF11 243 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ENPP5Q9UJA9 477 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ERRFI1Q9UJM3 462 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 FOXD3Q9UJU5 478 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 MKLN1Q9UL63 735 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 NDRG4Q9ULP0 352 aaKnown RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CBLCQ9ULV8 474 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PCDHGB4Q9UN71 923 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 USP22Q9UPT9 525 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 OR10H1Q9Y4A9 318 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PCDHGB5Q9Y5G0 923 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 LIPGQ9Y5X9 500 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CACNA1CQ13936 2221 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 MTORP42345 2549 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ALPK2Q86TB3 2170 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 NIPBLQ6KC79 2804 aaeCLIP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FAM166BA8MTA8 275 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 NPIPA5E9PKD4 350 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 GNB5O14775 395 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SNPHO15079 494 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 RGS10O43665 173 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SCO2O43819 266 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 HS6ST1O60243 411 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ADAM11O75078 769 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 TNFRSF21O75509 655 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 OXSR1O95747 527 aaPredicted RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ANGPTL1O95841 491 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ACTL6AO96019 429 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FABP3P05413 133 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 HPNP05981 417 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 NCK1P16333 377 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ABOP16442 354 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 TBXA2RP21731 343 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 PCMT1P22061 227 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CHMP24386 653 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 IGFBP5P24593 272 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FKBP2P26885 142 aaKnown RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 MSX1P28360 303 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CHRNB4P30926 498 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 EVI2BP34910 448 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 TIMP3P35625 211 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CHI3L1P36222 383 aaPredicted RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 UQCRFS1P47985 274 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 PRIM2P49643 509 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 HMGA2P52926 109 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 PPP5CP53041 499 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CDH15P55291 814 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 PRSS12P56730 875 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SMIM11AP58511 58 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 PPIAP62937 165 aaKnown RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SELENOWP63302 87 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SLC35A2P78381 396 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 POU6F2P78424 691 aaPredicted RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 HSF1Q00613 529 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CHRNEQ04844 493 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 MRPL49Q13405 166 aaKnown RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FGFBP1Q14512 234 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CD226Q15762 336 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 DECR1Q16698 335 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 NDUFAF6Q330K2 333 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FGD3Q5JSP0 725 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 DCST2Q5T1A1 773 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 UBE2UQ5VVX9 321 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 TIGD3Q6B0B8 471 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 OR5M10Q6IEU7 315 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 TYW3Q6IPR3 259 aaKnown RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ENPP6Q6UWR7 440 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ANGPTL8Q6UXH0 198 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FRRS1Q6ZNA5 592 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 DCDC5Q6ZRR9 648 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CCDC80Q76M96 950 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms