RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 C7orf61Q8IZ16 206 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 ZNF655Q8N720 491 aaPredicted RBP10.86□□□□□ -0.67
C11orf54-215ENST00000617482 SNX33Q8WV41 574 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 DACT3Q96B18 629 aaPredicted RBP10.86□□□□□ -0.67
C11orf54-215ENST00000617482 ANKRD9Q96BM1 317 aaPredicted RBP10.86□□□□□ -0.67
C11orf54-215ENST00000617482 SIPA1Q96FS4 1042 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 SCMH1Q96GD3 660 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 OR14A2Q96R54 314 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 CACNG6Q9BXT2 260 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 C14orf105Q9NVL8 296 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 HAO2Q9NYQ3 351 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 WSB2Q9NYS7 404 aaPredicted RBP10.86□□□□□ -0.67
C11orf54-215ENST00000617482 GNG8Q9UK08 70 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 PCOLCE2Q9UKZ9 415 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 MGAT4AQ9UM21 535 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 MYO9BQ13459 2157 aa10.86□□□□□ -0.67
C11orf54-215ENST00000617482 TRBV2A0A0J9YWF9 115 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 A6NCN8 305 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 FLRT2O43155 660 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 RDH16O75452 317 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 MT-ND4P03905 459 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 PSMB10P40306 273 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 PPP1CAP62136 330 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 ACTC1P68032 377 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 ACTA1P68133 377 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 PSG6Q00889 435 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 FAM53BQ14153 422 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 NNATQ16517 81 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 NDUFAF6Q330K2 333 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 CEP78Q5JTW2 689 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 ZCCHC12Q6PEW1 402 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 CA13Q8N1Q1 262 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 FRMD1Q8N878 549 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 OR8H1Q8NGG4 311 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 ZNF431Q8TF32 576 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-215ENST00000617482 ZNF304Q9HCX3 659 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 HRASLS2Q9NWW9 162 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 STMN3Q9NZ72 180 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 MRPL15Q9P015 296 aaKnown RBP10.85□□□□□ -0.67
C11orf54-215ENST00000617482 ING4Q9UNL4 249 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 NPFFR2Q9Y5X5 522 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 MCIDASD6RGH6 385 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 HRKO00198 91 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 GALR3O60755 368 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-215ENST00000617482 CDC123O75794 336 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-215ENST00000617482 SERPINI2O75830 405 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 KLF8O95600 359 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-215ENST00000617482 RPL4P36578 427 aaKnown RBP10.85□□□□□ -0.67
C11orf54-215ENST00000617482 MAGEB1P43366 347 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 TNFRSF4P43489 277 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 GBX2P52951 348 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-215ENST00000617482 KIAA1024LP59773 190 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 SIRPAP78324 504 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 ARHGAP11AQ6P4F7 1023 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 KRT77Q7Z794 578 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 CSNK1A1LQ8N752 337 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 ZNF671Q8TAW3 534 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 CTHRC1Q96CG8 243 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 SMIM19Q96E16 107 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 OR51J1Q9H342 316 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 DCAF16Q9NXF7 216 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 DNAJB12Q9NXW2 375 aaKnown RBP10.85□□□□□ -0.67
C11orf54-215ENST00000617482 SLCO1C1Q9NYB5 712 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 BAIAP2Q9UQB8 552 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 PRELID1Q9Y255 219 aa10.85□□□□□ -0.67
C11orf54-215ENST00000617482 TRAV1-2A0A0B4J238 106 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 C7orf66A4D0T2 115 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 OR2W5A6NFC9 320 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 IDSB3KWA1 339 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 OGG1O15527 345 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 NKX2-2O95096 273 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 UBL3O95164 117 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 AK1P00568 194 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 SERPINA3P01011 423 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 EDNRAP25101 427 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 OR3A3P47888 321 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 MMP15P51511 669 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 RPS11P62280 158 aaKnown RBP eCLIP10.84□□□□□ -0.67
C11orf54-215ENST00000617482 POU4F2Q12837 409 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 CDK5R1Q15078 307 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 ALG11Q2TAA5 492 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 DEFB110Q30KQ9 67 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 ZNF542PQ5EBM4 170 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 KIRREL2Q6UWL6 708 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 ZNF767PQ75MW2 155 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 TEX19Q8NA77 164 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 OR11H4Q8NGC9 324 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 OR9A4Q8NGU2 314 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 BAHD1Q8TBE0 780 aaPredicted RBP10.84□□□□□ -0.67
C11orf54-215ENST00000617482 SLC2A12Q8TD20 617 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 GCDHQ92947 438 aaPredicted RBP10.84□□□□□ -0.67
C11orf54-215ENST00000617482 FAM131CQ96AQ9 280 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 DERL3Q96Q80 235 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 NMNAT3Q96T66 252 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 TRAF4Q9BUZ4 470 aaPredicted RBP10.84□□□□□ -0.67
C11orf54-215ENST00000617482 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 NKIRAS2Q9NYR9 191 aa10.84□□□□□ -0.67
C11orf54-215ENST00000617482 CHRNA9Q9UGM1 479 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms