RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CDK10Q15131 360 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 ACKR1Q16570 336 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 ZNF628Q5EBL2 1059 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 UBAP2Q5T6F2 1119 aaKnown RBP7.72□□□□□ -1.17
GPC6-202ENST00000617456 FNDC7Q5VTL7 733 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 CLEC2AQ6UVW9 174 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 LHFPL3Q86UP9 236 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 PRR22Q8IZ63 422 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 CDYL2Q8N8U2 506 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 ANKFN1Q8N957 763 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 FNDC5Q8NAU1 212 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 FAM83FQ8NEG4 500 aaPredicted RBP7.72□□□□□ -1.17
GPC6-202ENST00000617456 OR1J4Q8NGS1 313 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 CLHC1Q8NHS4 586 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 HGDQ93099 445 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 SLC25A36Q96CQ1 311 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 CNRIP1Q96F85 164 aaPredicted RBP7.72□□□□□ -1.17
GPC6-202ENST00000617456 WFIKKN1Q96NZ8 548 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 COL21A1Q96P44 957 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 DOK1Q99704 481 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 SFXN3Q9BWM7 321 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 ACPTQ9BZG2 426 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 NXF5Q9H1B4 397 aaKnown RBP7.72□□□□□ -1.17
GPC6-202ENST00000617456 ARMC7Q9H6L4 198 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 GORASP2Q9H8Y8 452 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 SERINC1Q9NRX5 453 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 TAS2R1Q9NYW7 299 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 MID2Q9UJV3 735 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 DLGAP4Q9Y2H0 992 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 DSCAMO60469 2012 aa7.72□□□□□ -1.17
GPC6-202ENST00000617456 ANK3Q12955 4377 aaKnown RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 DEFB108AA8MXU0 73 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 MYO1GB0I1T2 1018 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 G3V2L1 256 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 PCDH7O60245 1069 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ICOSLGO75144 302 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 CRLF1O75462 422 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 RCBTB2O95199 551 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 SCGB1D2O95969 90 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ANXA4P09525 319 aaPredicted RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 CT45A8P0DMV1 189 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 CT45A9P0DMV2 189 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 UROSP10746 265 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 MYL2P10916 166 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ATF4P18848 351 aaPredicted RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 NCF2P19878 526 aaPredicted RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 FEN1P39748 380 aaKnown RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 PTH2RP49190 550 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 RAE1P78406 368 aaKnown RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 FAM27E3Q08E93 113 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ZNF763Q0D2J5 394 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 PLCXD2Q0VAA5 305 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 TRIM16LQ309B1 348 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 CT45A2Q5DJT8 189 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 SGO1Q5FBB7 561 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 HMBOX1Q6NT76 420 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ENPP6Q6UWR7 440 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ADGRE4PQ86SQ3 457 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 PHC2Q8IXK0 858 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 OR52R1Q8NGF1 315 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 OR56B2PQ8NGI1 322 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 OR4D10Q8NGI6 311 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ZNF420Q8TAQ5 688 aaPredicted RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 C16orf78Q8WTQ4 265 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 CAPSLQ8WWF8 208 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 PTP4A1Q93096 173 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 UCN3Q969E3 161 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 PGM2Q96G03 612 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ZC3HAV1LQ96H79 300 aaKnown RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 VSTM2LQ96N03 204 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 FAM111AQ96PZ2 611 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 HS3ST6Q96QI5 342 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 PIGQQ9BRB3 760 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 MED18Q9BUE0 208 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 PIGMQ9H3S5 423 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 GSTO2Q9H4Y5 243 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 C12orf49Q9H741 205 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 METTL7AQ9H8H3 244 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 ZC4H2Q9NQZ6 224 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 OXSMQ9NWU1 459 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 BCAP29Q9UHQ4 241 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 GLS2Q9UI32 602 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 MRTO4Q9UKD2 239 aaKnown RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 ABCG2Q9UNQ0 655 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 PLLPQ9Y342 182 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 WIF1Q9Y5W5 379 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 CHD3Q12873 2000 aaKnown RBP7.71□□□□□ -1.18
GPC6-202ENST00000617456 ABCA1O95477 2261 aa7.71□□□□□ -1.18
GPC6-202ENST00000617456 MED12LQ86YW9 2145 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 A8MXE2 369 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 GMDSO60547 372 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 TSPAN2O60636 221 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 PLIN3O60664 434 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 TBX19O60806 448 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 TNFAIP8O95379 198 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 CRHP06850 196 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 FGF4P08620 206 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 IL3P08700 152 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 QDPRP09417 244 aa7.7□□□□□ -1.18
GPC6-202ENST00000617456 ZNF23P17027 643 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms