RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 H3BML4 177 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 CTIFO43310 598 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 EEF1E1O43324 174 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 KCNK2O95069 426 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 NKX2-2O95096 273 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 OXSR1O95747 527 aaPredicted RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 HSPA4LO95757 839 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 IL33O95760 270 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 EPPINO95925 133 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 SERPINE1P05121 402 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 HMGN2P05204 90 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 FGF4P08620 206 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ALDOCP09972 364 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 PRPS2P11908 318 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 NEFHP12036 1026 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ZNF708P17019 499 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 NAGAP17050 411 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ELAVL4P26378 380 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 DPP4P27487 766 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 IL12AP29459 219 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 SRD5A2P31213 254 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 UQCRC1P31930 480 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 CEACAM8P31997 349 aaPredicted RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 MPIP34949 423 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 PTGER4P35408 488 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 SOAT1P35610 550 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 SLC6A8P48029 635 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 PRIM2P49643 509 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 PNLIPRP2P54317 469 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ABCE1P61221 599 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 DCAF7P61962 342 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 SIRPAP78324 504 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 BST1Q10588 318 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 FUT5Q11128 374 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 HLXQ14774 488 aaPredicted RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 MLC1Q15049 377 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 TOMM34Q15785 309 aaPredicted RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 RIPPLY2Q5TAB7 128 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 RAET1LQ5VY80 246 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 TMEM211Q6ICI0 200 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 OR4F3Q6IEY1 312 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 TMEM81Q6P7N7 255 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 CBLN3Q6UW01 205 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 RNF165Q6ZSG1 346 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 LUZP2Q86TE4 346 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 TMEM200AQ86VY9 491 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 IFNEQ86WN2 208 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 NUDCD3Q8IVD9 361 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 RIMKLAQ8IXN7 391 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 FNDC5Q8NAU1 212 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 OR4K17Q8NGC6 315 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 MBD3L2Q8NHZ7 208 aaPredicted RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 FAM76AQ8TAV0 307 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 LINC01560Q8TB33 94 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 POC1BQ8TC44 478 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 GPR151Q8TDV0 419 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 DUSP19Q8WTR2 217 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ASB5Q8WWX0 329 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.1□□□□□ -1.75
CUL3-216ENST00000617432 INTS12Q96CB8 462 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 TUBGCP3Q96CW5 907 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 DNAJA3Q96EY1 480 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 MS4A4EQ96PG1 132 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 PAIP2Q9BPZ3 127 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 GPATCH1Q9BRR8 931 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 TRMOQ9BU70 441 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 NUF2Q9BZD4 464 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ROPN1BQ9BZX4 212 aaPredicted RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 WDR55Q9H6Y2 383 aaPredicted RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 ROPN1Q9HAT0 212 aaPredicted RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 KCNK9Q9NPC2 374 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 CHST11Q9NPF2 352 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 KCNJ16Q9NPI9 418 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ZCCHC3Q9NUD5 404 aaKnown RBP4.1□□□□□ -1.75
CUL3-216ENST00000617432 TAS2R9Q9NYW1 312 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 TAS2R7Q9NYW3 318 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ZNF69Q9UC07 566 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ATP6V1HQ9UI12 483 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 TAGLN3Q9UI15 199 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 MID2Q9UJV3 735 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 CLEC4AQ9UMR7 237 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 VDAC3Q9Y277 283 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 CFL2Q9Y281 166 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 ZNF337Q9Y3M9 751 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 SNX8Q9Y5X2 465 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 DNAJC13O75165 2243 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 PCNX3Q9H6A9 2034 aa4.1□□□□□ -1.75
CUL3-216ENST00000617432 POLQO75417 2590 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 A0A1W2PRB8 838 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 TMEM120BA0PK00 339 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 CLDN24A6NM45 220 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 H3BQF6 201 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 SDHDO14521 159 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 ANKRD28O15084 1053 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 EMC8O43402 210 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 HCRTR2O43614 444 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 EFNA2O43921 213 aa4.09□□□□□ -1.75
CUL3-216ENST00000617432 TBX19O60806 448 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms