RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 HOXB6P17509 224 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 CLK1P49759 484 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 RPS3AP61247 264 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 SPIBQ01892 262 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 EGR4Q05215 589 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 TRAM2Q15035 370 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 CTU2Q2VPK5 515 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 EMC4Q5J8M3 183 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 PDSS1Q5T2R2 415 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 HBMQ6B0K9 141 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 TTC33Q6PID6 262 aaPredicted RBP14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 TMPPEQ6ZT21 453 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 CHMP1BQ7LBR1 199 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 ZNF605Q86T29 641 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 CD163Q86VB7 1156 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 PM20D2Q8IYS1 436 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 GALNT11Q8NCW6 608 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 PAPD5Q8NDF8 572 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 OR2V1Q8NHB1 315 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 STK35Q8TDR2 534 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 OSTF1Q92882 214 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 ADGRG7Q96K78 797 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 POTEKPQ9BYX7 375 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 YY1AP1Q9H869 796 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 MAN2C1Q9NTJ4 1040 aa14.04□□□□□ -0.16
PCDHGC3-204ENST00000617222 AHRRA9YTQ3 701 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 CXCL13O43927 109 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 NPIPB7O75200 414 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 RRM2P31350 389 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 EIF1AXP47813 144 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 CARD18P57730 90 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 SMIM11AP58511 58 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 MYBPHQ13203 477 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 SGCBQ16585 318 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 C1orf140Q5VVS0 124 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 Q6ZPB1 254 aaPredicted RBP14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 DOLPP1Q86YN1 238 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 OR52J3Q8NH60 311 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 OR10D3Q8NH80 312 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 TMEM255BQ8WV15 326 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 KTI12Q96EK9 354 aaPredicted RBP14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 DUS3LQ96G46 650 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 ZNF845Q96IR2 970 aaPredicted RBP14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 DHRS1Q96LJ7 313 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 HS6ST2Q96MM7 605 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 TUBA1CQ9BQE3 449 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 TMEM43Q9BTV4 400 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 COQ10BQ9H8M1 238 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 OSGIN2Q9Y236 505 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 HDGFL3Q9Y3E1 203 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 AP4S1Q9Y587 144 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 SHANK1Q9Y566 2161 aa14.03□□□□□ -0.16
PCDHGC3-204ENST00000617222 TRAV36DV7A0A075B6V5 113 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 A0A1W2PRQ8 180 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 SULT2B1O00204 365 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 KPNA4O00629 521 aaPredicted RBP14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 ENTPD5O75356 428 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 TIPRLO75663 272 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 GADD45GO95257 159 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 AHSA1O95433 338 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 CST1P01037 141 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 IMPDH2P12268 514 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 GNLYP22749 145 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 IDUAP35475 653 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 RBM34P42696 430 aaKnown RBP14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 RPS5P46782 204 aaKnown RBP14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 UGT2B15P54855 530 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR2B6P58173 313 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 DGCR6Q14129 220 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 FGD3Q5JSP0 725 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR2T5Q6IEZ7 315 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 PODNL1Q6PEZ8 512 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 TBPL2Q6SJ96 375 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 ATCAYQ86WG3 371 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 C10orf67Q8IYJ2 551 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR2T29Q8NH02 315 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZPLD1Q8TCW7 415 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 TMEM239Q8WW34 195 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 PYDC1Q8WXC3 89 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 TAAR8Q969N4 342 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 EPYCQ99645 322 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZNF426Q9BUY5 554 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 ANKRD19PQ9H560 264 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 SH3BGRL2Q9UJC5 107 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 TINAGQ9UJW2 476 aa14.02□□□□□ -0.17
PCDHGC3-204ENST00000617222 A0A087WUU8 490 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 TRGV8A0A0C4DH27 118 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 TRBV4-1A0A0J9YWV2 114 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 FIGNL2A6NMB9 653 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 CLCA1A8K7I4 914 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 TNFRSF11BO00300 401 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 GNGT2O14610 69 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 WDR1O75083 606 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 KRT36O76013 467 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 GABRA1P14867 456 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 DIO1P49895 249 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 CASP6P55212 293 aa14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 LSM11P83369 360 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 PPP1R8Q12972 351 aaKnown RBP14.01□□□□□ -0.17
PCDHGC3-204ENST00000617222 SF3B4Q15427 424 aaKnown RBP eCLIP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms