RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 BIRC5O15392 142 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 ITGA5P08648 1049 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 CD40P25942 277 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 FKBP2P26885 142 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 MAGEA8P43361 318 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC1A6P48664 564 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 NUDT6P53370 316 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 CLNS1AP54105 237 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 H3F3AP84243 136 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 GABRA6Q16445 453 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 SYPL1Q16563 259 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 DPY19L1Q2PZI1 675 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 FAM174BQ3ZCQ3 159 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 KLHL17Q6TDP4 642 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 RNF130Q86XS8 419 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 ANKFN1Q8N957 763 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 CCDC115Q96NT0 180 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 DHRS9Q9BPW9 319 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 RHNO1Q9BSD3 238 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 CBLN4Q9NTU7 201 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 TMEM181Q9P2C4 612 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 TRAPPC4Q9Y296 219 aa18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-208ENST00000616074 A0A096LNT2 108 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 TMED7-TICAM2A0A0A6YYA0 188 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 TMEM72A0PK05 275 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 E9PBE3 544 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 M0R1B8 84 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 PDLIM1O00151 329 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 GPRIN2O60269 458 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 DHRS4L1P0CG22 281 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 IMPDH2P12268 514 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 LBPP18428 481 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 S100A3P33764 101 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 NME5P56597 212 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 KRT71Q3SY84 523 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 CASP12Q6UXS9 341 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 MUC15Q8N387 334 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 HTRA1Q92743 480 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 TEX37Q96LM6 180 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 ADAD1Q96M93 576 aaKnown RBP18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 MUS81Q96NY9 551 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 C1QTNF6Q9BXI9 259 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC38A1Q9H2H9 487 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 BTNL2Q9UIR0 455 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 HAO1Q9UJM8 370 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 OSGIN1Q9UJX0 560 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 TMED7Q9Y3B3 224 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 FLVCR1Q9Y5Y0 555 aa18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 HEATR1Q9H583 2144 aaKnown RBP18.25■□□□□ 0.51
TRAPPC3-208ENST00000616074 CHRM4P08173 479 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 BGNP21810 368 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 HTR3AP46098 478 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 POLR2HP52434 150 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 C9orf135Q5VTT2 229 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 OR7E24Q6IFN5 339 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 HMBOX1Q6NT76 420 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 HIPK1Q86Z02 1210 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 LRRC34Q8IZ02 419 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 FBXL14Q8N1E6 418 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 WDR31Q8NA23 367 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 OR10H5Q8NGA6 315 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 DDIT4LQ96D03 193 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 TRNT1Q96Q11 434 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 AMBRA1Q9C0C7 1298 aa18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 YLPM1P49750 1951 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-208ENST00000616074 AGAP5A6NIR3 686 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 RGS16O15492 202 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 ZNF208O43345 1280 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 SNUPNO95149 360 aaKnown RBP18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 ALDOCP09972 364 aaKnown RBP18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 TACR3P29371 465 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 CDKN2CP42773 168 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 FABP6P51161 128 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 UFM1P61960 85 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC35A1P78382 337 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC25A3Q00325 362 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 CMIPQ8IY22 773 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 WDR60Q8WVS4 1066 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 INPP5KQ9BT40 448 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 MEAF6Q9HAF1 191 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 SSU72Q9NP77 194 aaKnown RBP18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC7A10Q9NS82 523 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 PNPOQ9NVS9 261 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC9A8Q9Y2E8 581 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 STAB1Q9NY15 2570 aa18.23■□□□□ 0.51
TRAPPC3-208ENST00000616074 ZC3H12DA2A288 527 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 FAM234BA2RU67 622 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 CCDC154A6NI56 674 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 TM9SF1O15321 606 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 EIF1BO60739 113 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 RPS4Y1P22090 263 aaKnown RBP18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 IL12AP29459 219 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 SLC17A1Q14916 467 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 TSPO2Q5TGU0 170 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 OGFOD2Q6N063 350 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 WDR93Q6P2C0 686 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 CLEC2AQ6UVW9 174 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 LRRC74BQ6ZQY2 392 aa18.22■□□□□ 0.51
TRAPPC3-208ENST00000616074 DEPDC4Q8N2C3 294 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms