RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 SMARCD3Q6STE5 483 aa17.52■□□□□ 0.4
MMP28-204ENST00000615136 SPATC1Q76KD6 591 aa17.52■□□□□ 0.4
MMP28-204ENST00000615136 OR6C1Q96RD1 312 aa17.52■□□□□ 0.4
MMP28-204ENST00000615136 HCAR1Q9BXC0 346 aa17.52■□□□□ 0.4
MMP28-204ENST00000615136 MED20Q9H944 212 aa17.52■□□□□ 0.4
MMP28-204ENST00000615136 NPAP1Q9NZP6 1156 aa17.52■□□□□ 0.4
MMP28-204ENST00000615136 SUSD2Q9UGT4 822 aa17.52■□□□□ 0.4
MMP28-204ENST00000615136 IGHV3-20A0A0C4DH32 117 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 LRRN3E7EW58 273 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 DYRK3O43781 588 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 GALP22466 123 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 RFX2P48378 723 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 SIGLEC14Q08ET2 396 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 FNDC7Q5VTL7 733 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 FCRLBQ6BAA4 426 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 PLBD1Q6P4A8 553 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 CBLN3Q6UW01 205 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 FAM131AQ6UXB0 335 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 NRARPQ7Z6K4 114 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 C1orf210Q8IVY1 113 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 DNAJA4Q8WW22 397 aaPredicted RBP17.52■□□□□ 0.39
MMP28-204ENST00000615136 DCLRE1CQ96SD1 692 aaKnown RBP17.52■□□□□ 0.39
MMP28-204ENST00000615136 LRRN3Q9H3W5 708 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 GRIP1Q9Y3R0 1128 aa17.52■□□□□ 0.39
MMP28-204ENST00000615136 COL5A1P20908 1838 aaPredicted RBP17.52■□□□□ 0.39
MMP28-204ENST00000615136 A0A1W2PQ09 198 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 ZC3H12DA2A288 527 aaKnown RBP17.51■□□□□ 0.39
MMP28-204ENST00000615136 POLR1CO15160 346 aaPredicted RBP17.51■□□□□ 0.39
MMP28-204ENST00000615136 SEC14L5O43304 696 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 PTP4A3O75365 173 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 RCBTB2O95199 551 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 IL33O95760 270 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 BMP7P18075 431 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 CELP19835 753 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 ATP6V1E1P36543 226 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 PSMD4P55036 377 aaKnown RBP17.51■□□□□ 0.39
MMP28-204ENST00000615136 EBPQ15125 230 aaKnown RBP17.51■□□□□ 0.39
MMP28-204ENST00000615136 CARTPTQ16568 116 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 AGAP6Q5VW22 663 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 MEPCEQ7L2J0 689 aaKnown RBP17.51■□□□□ 0.39
MMP28-204ENST00000615136 ZNF550Q7Z398 422 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 BMP8AQ7Z5Y6 402 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 GDPD1Q8N9F7 314 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 OR51G2Q8NGK0 314 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 KISS1RQ969F8 398 aaPredicted RBP17.51■□□□□ 0.39
MMP28-204ENST00000615136 LCORQ96JN0 433 aaPredicted RBP17.51■□□□□ 0.39
MMP28-204ENST00000615136 AGAP4Q96P64 663 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 TNFRSF13CQ96RJ3 184 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 ADOQ96SZ5 270 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 CMC2Q9NRP2 79 aa17.51■□□□□ 0.39
MMP28-204ENST00000615136 GABRPO00591 440 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 TOX3O15405 576 aaPredicted RBP17.5■□□□□ 0.39
MMP28-204ENST00000615136 GDF9O60383 454 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 PAICSP22234 425 aaKnown RBP17.5■□□□□ 0.39
MMP28-204ENST00000615136 CRYZQ08257 329 aaKnown RBP17.5■□□□□ 0.39
MMP28-204ENST00000615136 SQSTM1Q13501 440 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 ASAH1Q13510 395 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 GPR50Q13585 617 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 RHBDD2Q6NTF9 364 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 ULK3Q6PHR2 472 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 PRR23CQ6ZRP0 262 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 DIRAS2Q96HU8 199 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 CCDC74BQ96LY2 380 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 TMED9Q9BVK6 235 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 TIGARQ9NQ88 270 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 C2orf92A0A1B0GVN3 265 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 FABP12A6NFH5 140 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 FRG2CA6NGY1 282 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 TTC36A6NLP5 189 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 CASKO14936 926 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 UTS2O95399 124 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 PPP3R1P63098 170 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 SCN1BQ07699 218 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 PWWP2BQ6NUJ5 590 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 MARCH9Q86YJ5 346 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 CMIPQ8IY22 773 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 CDK20Q8IZL9 346 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 ACBD7Q8N6N7 88 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 LRRC17Q8N6Y2 441 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 FAM71CQ8NEG0 241 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 ATP6V1C2Q8NEY4 427 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 OTULINQ96BN8 352 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 MKKSQ9NPJ1 570 aaPredicted RBP17.5■□□□□ 0.39
MMP28-204ENST00000615136 UBQLN4Q9NRR5 601 aa17.5■□□□□ 0.39
MMP28-204ENST00000615136 SMIM30A4D0T7 59 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 FAM86C2PA6NEL3 165 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 C12orf71A8MTZ7 269 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 CSF3P09919 207 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 ZNF362Q5T0B9 420 aaPredicted RBP17.49■□□□□ 0.39
MMP28-204ENST00000615136 NCCRP1Q6ZVX7 275 aaPredicted RBP17.49■□□□□ 0.39
MMP28-204ENST00000615136 KLBQ86Z14 1044 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 OR4D9Q8NGE8 314 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 STT3BQ8TCJ2 826 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 C3orf49Q96BT1 292 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 TIMP4Q99727 224 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 IFT27Q9BW83 186 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 MCCC2Q9HCC0 563 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 APMAPQ9HDC9 416 aa17.49■□□□□ 0.39
MMP28-204ENST00000615136 SHISA3A0PJX4 238 aa17.48■□□□□ 0.39
MMP28-204ENST00000615136 EFCAB7A8K855 629 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms