RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PQLC1Q8N2U9 271 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 MEIOBQ8N635 442 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 CPT1CQ8TCG5 803 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 KLHL15Q96M94 604 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 OR5B2Q96R09 309 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 TIMP4Q99727 224 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 PKP2Q99959 881 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 FUZQ9BT04 418 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 OR11A1Q9GZK7 315 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 SPRR3Q9UBC9 169 aa13.24□□□□□ -0.29
CD48-203ENST00000613788 IGKV1D-42A0A075B6H8 117 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 TRAV36DV7A0A075B6V5 113 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 SH3PXD2BA1X283 911 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 H0Y3Z8 333 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 BCKDKO14874 412 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 OR2T1O43869 369 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 NPIPB7O75200 414 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 AHSA1O95433 338 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 IGF2P01344 180 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 OPN1LWP04000 364 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 EDN3P14138 238 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 ZNF708P17019 499 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 FPR1P21462 350 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 TDGF1P3P51864 188 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 MLLT10P55197 1068 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 EGR4Q05215 589 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 CRYZQ08257 329 aaKnown RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 PPP1R8Q12972 351 aaKnown RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 WLSQ5T9L3 541 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 C1orf140Q5VVS0 124 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 PM20D2Q8IYS1 436 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 UBQLNLQ8IYU4 475 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 OR4C15Q8NGM1 316 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 OR6S1Q8NH40 331 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 NRBF2Q96F24 287 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 NTN4Q9HB63 628 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 VNN3Q9NY84 501 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 C6orf203Q9P0P8 240 aaPredicted RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 TRAPPC4Q9Y296 219 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 NCKAP5O14513 1909 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 ZC3H12DA2A288 527 aaKnown RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 NPIPA2E9PIF3 369 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 NPIPA3F8WFD2 350 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 EIF1AYO14602 144 aaKnown RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 SEC14L5O43304 696 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 MGRN1O60291 552 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 OR10H3O60404 316 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 CCNB2O95067 398 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 ANPEPP15144 967 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 PTGS2P35354 604 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 IDUAP35475 653 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 UGT2B15P54855 530 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 CLDN18P56856 261 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 CLDN20P56880 219 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 RPS3AP61247 264 aaKnown RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 HSF1Q00613 529 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 MYBPHQ13203 477 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 RIPK1Q13546 671 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 SEC23BQ15437 767 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 MICAQ29983 383 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 FAM69AQ5T7M9 428 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 HMBOX1Q6NT76 420 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 TBPL2Q6SJ96 375 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 GFRALQ6UXV0 394 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 TMPPEQ6ZT21 453 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 HIPK1Q86Z02 1210 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 P3H2Q8IVL5 708 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 NRMQ8IXM6 262 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 OR4K5Q8NGD3 323 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 OR5K1Q8NHB7 308 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 PIGXQ8TBF5 258 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 KTI12Q96EK9 354 aaPredicted RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 WDYHV1Q96HA8 205 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 ARL5BQ96KC2 179 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 TAPBPLQ9BX59 468 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 SEMA6AQ9H2E6 1030 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 TIGARQ9NQ88 270 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 PAQR5Q9NXK6 330 aaPredicted RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 STX18Q9P2W9 335 aaKnown RBP13.23□□□□□ -0.29
CD48-203ENST00000613788 TMEM5Q9Y2B1 443 aa13.23□□□□□ -0.29
CD48-203ENST00000613788 A0A0J9YW62 118 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 G3V2T6 193 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 SULT2B1O00204 365 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 KPNA4O00629 521 aaPredicted RBP13.22□□□□□ -0.29
CD48-203ENST00000613788 PMS2P2O95744 297 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 ZNF23P17027 643 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 PTNP21246 168 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 SHC1P29353 583 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 RPS5P46782 204 aaKnown RBP13.22□□□□□ -0.29
CD48-203ENST00000613788 SUCLG1P53597 346 aaKnown RBP13.22□□□□□ -0.29
CD48-203ENST00000613788 IST1P53990 364 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 CTBP2P56545 445 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 CARD18P57730 90 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 CSNK2A1P68400 391 aaPredicted RBP13.22□□□□□ -0.29
CD48-203ENST00000613788 SRYQ05066 204 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 PRKCDQ05655 676 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 RBPJQ06330 500 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 MFSD13AQ14CX5 517 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 SHQ1Q6PI26 577 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms