RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 UBQLN2Q9UHD9 624 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 ADAM29Q9UKF5 820 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 SLC22A31A6NKX4 558 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 CT62P0C5K7 136 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 ERGP11308 486 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 CCR4P51679 360 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 ERV3-1Q14264 604 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 DEFB115Q30KQ5 88 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM35AQ53FP2 167 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 ZNF542PQ5EBM4 170 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 MEIOBQ8N635 442 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 TRIM43Q96BQ3 446 aaPredicted RBP18.83■□□□□ 0.6
SSBP3-216ENST00000610401 RASD2Q96D21 266 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 FGF22Q9HCT0 170 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 KCMF1Q9P0J7 381 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 ING1Q9UK53 422 aaPredicted RBP18.83■□□□□ 0.6
SSBP3-216ENST00000610401 SIGLEC7Q9Y286 467 aa18.83■□□□□ 0.6
SSBP3-216ENST00000610401 KLF4O43474 513 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 CTSVO60911 334 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 TPOP07202 933 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 CMPK1P30085 196 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 HSF2Q03933 536 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 PUDPQ08623 228 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 KRCC1Q9NPI7 259 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-216ENST00000610401 VPS13AQ96RL7 3174 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 A0A1W2PQU0 124 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 TCRBV16S1A1N1A0A5B0 115 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 POM121BA6NF01 834 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 PCP4L1A6NKN8 68 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 BLOC1S5-TXNDC5H3BN57 136 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 ARPC5O15511 151 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 FGF17O60258 216 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 MAS1P04201 325 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 BTG1P62324 171 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 PLA2G7Q13093 441 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM65Q6PI78 240 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 OR8S1Q8NH09 359 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 HSPA12BQ96MM6 686 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 ULBP3Q9BZM4 244 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 COPS3Q9UNS2 423 aa18.82■□□□□ 0.6
SSBP3-216ENST00000610401 DUXAA6NLW8 204 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 EMDP50402 254 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 AANATQ16613 207 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 OR5M10Q6IEU7 315 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 ANGPTL6Q8NI99 470 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 CD93Q9NPY3 652 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 CMC2Q9NRP2 79 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 PHPT1Q9NRX4 125 aaPredicted RBP18.81■□□□□ 0.6
SSBP3-216ENST00000610401 TBX21Q9UL17 535 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 J3QRE1 110 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 PLPP2O43688 288 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 RCBTB2O95199 551 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 CFL1P23528 166 aaKnown RBP18.81■□□□□ 0.6
SSBP3-216ENST00000610401 ERVK-25P63136 954 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 HSD17B12Q53GQ0 312 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 ALG10BQ5I7T1 473 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 SFXN5Q8TD22 340 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 CXorf58Q96LI9 332 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 SRMSQ9H3Y6 488 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 RPS6KB2Q9UBS0 482 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 FXYD6-FXYD2A0A087WZ82 144 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 MCIDASD6RGH6 385 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 STX11O75558 287 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 GPANK1O95872 356 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 CTSBP07858 339 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 CST6Q15828 149 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 ZIC1Q15915 447 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 ENPP7Q6UWV6 458 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 GJD3Q8N144 294 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 SPERTQ8NA61 448 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 MOSPD2Q8NHP6 518 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 SFXN2Q96NB2 322 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 ZNF436Q9C0F3 470 aaPredicted RBP18.81■□□□□ 0.6
SSBP3-216ENST00000610401 FXYD6Q9H0Q3 95 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 LIN7BQ9HAP6 207 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 ACSL5Q9ULC5 683 aa18.81■□□□□ 0.6
SSBP3-216ENST00000610401 RTTNQ86VV8 2226 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 CEACAM5P06731 702 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 ACTR1BP42025 376 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 MAP2K6P52564 334 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 ACTR1AP61163 376 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 AMZ1Q400G9 498 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 CDONQ4KMG0 1287 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 ADAMTSL4Q6UY14 1074 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 PARGQ86W56 976 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 LNX2Q8N448 690 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 TTLQ8NG68 377 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 PAWRQ96IZ0 340 aaKnown RBP18.8■□□□□ 0.6
SSBP3-216ENST00000610401 OR1F2PQ96R84 312 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 TMEM168Q9H0V1 697 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 A0A1B0GWA3 101 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 A0A1W2PPL8 197 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 HRKO00198 91 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 IFNA7P01567 189 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 SLC35G6P0C7Q6 338 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 DDX6P26196 483 aaKnown RBP eCLIP18.8■□□□□ 0.61e-6■■□□□ 12.6
SSBP3-216ENST00000610401 HSD17B2P37059 387 aa18.8■□□□□ 0.6
SSBP3-216ENST00000610401 VASPP50552 380 aaPredicted RBP18.8■□□□□ 0.6
SSBP3-216ENST00000610401 EEF1A1P68104 462 aaKnown RBP18.8■□□□□ 0.6
SSBP3-216ENST00000610401 AGBL4Q5VU57 503 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms