RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 CCKARP32238 428 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 CTBP2P56545 445 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 GUCY1A3Q02108 690 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 PLAURQ03405 335 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 RPS26P11Q5JNZ5 115 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 MRPL2Q5T653 305 aaKnown RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 FAM214BQ7L5A3 538 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 VRK2Q86Y07 508 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 MSRB3Q8IXL7 192 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 OR52P1PQ8NH57 321 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 ROBO4Q8WZ75 1007 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 GTPBP3Q969Y2 492 aaKnown RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 CPNE4Q96A23 557 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 GMPPAQ96IJ6 420 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 SRXN1Q9BYN0 137 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 OPN3Q9H1Y3 402 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 ZNF385DQ9H6B1 395 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 CACYBPQ9HB71 228 aaKnown RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 TMEM160Q9NX00 188 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 VAPAQ9P0L0 249 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-208ENST00000608287 EMC9Q9Y3B6 208 aa17.09■□□□□ 0.33
SGMS1-208ENST00000608287 DSPPQ9NZW4 1301 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 A0A0G2JPF8 293 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 A0A1W2PNR3 127 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 HNRNPCL2B2RXH8 293 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 HNRNPCL3B7ZW38 293 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 AP3D1O14617 1153 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 HNRNPCL1O60812 293 aaKnown RBP17.08■□□□□ 0.32
SGMS1-208ENST00000608287 HNRNPCL4P0DMR1 293 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 PPIBP23284 216 aaKnown RBP17.08■□□□□ 0.32
SGMS1-208ENST00000608287 IDH2P48735 452 aaKnown RBP17.08■□□□□ 0.32
SGMS1-208ENST00000608287 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.32
SGMS1-208ENST00000608287 GUSBP1Q15486 140 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF239Q16600 458 aaKnown RBP17.08■□□□□ 0.32
SGMS1-208ENST00000608287 LIN52Q52LA3 116 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 METTL21CQ5VZV1 264 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 GTF2IRD2BQ6EKJ0 949 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF474Q6S9Z5 364 aaPredicted RBP17.08■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF550Q7Z398 422 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 GTF2IRD2Q86UP8 949 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 MAL2Q969L2 176 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 OR5B2Q96R09 309 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 BEX2Q9BXY8 128 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 COQ10BQ9H8M1 238 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 A4GALTQ9NPC4 353 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 LEF1Q9UJU2 399 aaPredicted RBP17.08■□□□□ 0.32
SGMS1-208ENST00000608287 PROCRQ9UNN8 238 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 LAMP3Q9UQV4 416 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 NDUFAF1Q9Y375 327 aa17.08■□□□□ 0.32
SGMS1-208ENST00000608287 C5orf58C9J3I9 102 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 ANGPT2O15123 496 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 ADAM11O75078 769 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 SS18L1O75177 396 aaPredicted RBP17.07■□□□□ 0.32
SGMS1-208ENST00000608287 PABPC4LP0CB38 370 aaKnown RBP17.07■□□□□ 0.32
SGMS1-208ENST00000608287 BMP2P12643 396 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 APOBEC1P41238 236 aaKnown RBP17.07■□□□□ 0.32
SGMS1-208ENST00000608287 KRTAP24-1Q3LI83 254 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF836Q6ZNA1 936 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 GRINAQ7Z429 371 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 C19orf24Q9BVV8 132 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 CCDC106Q9BWC9 280 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 BARX1Q9HBU1 254 aaPredicted RBP17.07■□□□□ 0.32
SGMS1-208ENST00000608287 CTPS2Q9NRF8 586 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 GLRX2Q9NS18 164 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 RLIMQ9NVW2 624 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF232Q9UNY5 417 aa17.07■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF443Q9Y2A4 671 aaPredicted RBP17.07■□□□□ 0.32
SGMS1-208ENST00000608287 SPIN1Q9Y657 262 aaPredicted RBP17.07■□□□□ 0.32
SGMS1-208ENST00000608287 TRBV5-3A0A0A0MS03 114 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 CFAP73A6NFT4 308 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 EVPLLA8MZ36 301 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 CGAP01215 116 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 TFPIP10646 304 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 UQCRBP14927 111 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 ARFIP2P53365 341 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 LARS2Q15031 903 aaKnown RBP17.06■□□□□ 0.32
SGMS1-208ENST00000608287 GCNT6Q5T4J0 391 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF440Q8IYI8 595 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 ZNF610Q8N9Z0 462 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 OR6K3Q8NGY3 331 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 BBS10Q8TAM1 723 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 RNF128Q8TEB7 428 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 SLC25A43Q8WUT9 341 aaPredicted RBP17.06■□□□□ 0.32
SGMS1-208ENST00000608287 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
SGMS1-208ENST00000608287 ANK3Q12955 4377 aaKnown RBP17.05■□□□□ 0.32
SGMS1-208ENST00000608287 IGHV3-15A0A0B4J1V0 119 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 CDHR4A6H8M9 788 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 THBS1P07996 1170 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 GKN3PP0CG01 181 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 CCNA2P20248 432 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 RAC3P60763 192 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 EPS8Q12929 822 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 RNPS1Q15287 305 aaKnown RBP17.05■□□□□ 0.32
SGMS1-208ENST00000608287 SYT14P1Q58G82 188 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 CGB2Q6NT52 195 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 DLEU7Q6UYE1 221 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 FCRLAQ7L513 359 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 DHDDSQ86SQ9 333 aa17.05■□□□□ 0.32
SGMS1-208ENST00000608287 C10orf111Q8N326 155 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms