RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ZNF487B1APH4 448 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 XRCC3O43542 346 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 DUX1O43812 170 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CPNE6O95741 557 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 PNMTP11086 282 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 IL1RNP18510 177 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 AHRP35869 848 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 FAM209BQ5JX69 171 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 OR2G6Q5TZ20 316 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 SLC51BQ86UW2 128 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CLECL1Q8IZS7 167 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 ZNF808Q8N4W9 903 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CREB3L4Q8TEY5 395 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 KIAA1143Q96AT1 154 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 SLC2A13Q96QE2 648 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 SLC23A1Q9UHI7 598 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 C2orf78A6NCI8 922 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 HHLA1C9JL84 531 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 SOD2P04179 222 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 ZP3P21754 424 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 KDELR2P33947 212 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 GDPGP1Q6ZNW5 385 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 RETREG3Q86VR2 466 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 SLC6A17Q9H1V8 727 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 GAREM1Q9H706 876 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 C12orf10Q9HB07 376 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 IGSF5Q9NSI5 407 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 PTAFRP25105 342 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 MLC1Q15049 377 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 ELOCQ15369 112 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 DBX2Q6ZNG2 339 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 BOCQ9BWV1 1114 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CSF2RBP32927 897 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 DNAJC22Q8N4W6 341 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OR4F15Q8NGB8 312 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OR5M8Q8NGP6 311 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 PEX11GQ96HA9 241 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 SLC6A20Q9NP91 592 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 SLC2A9Q9NRM0 540 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 FAM212BQ9NTI7 297 aaPredicted RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 DNAJC15Q9Y5T4 150 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 MMP2P08253 660 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 RAC2P15153 192 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 SNTB1Q13884 538 aaKnown RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 ZNF695Q8IW36 515 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 SGPP2Q8IWX5 399 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 ZNF680Q8NEM1 530 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 TRIM77I1YAP6 450 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 MRPS14O60783 128 aaKnown RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 HRH2P25021 359 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 GDNFP39905 211 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 SOWAHCQ53LP3 525 aaPredicted RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OR4C11Q6IEV9 310 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 TMPPEQ6ZT21 453 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OR52N2Q8NGI0 321 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OR13C9Q8NGT0 318 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 DVL3Q92997 716 aaPredicted RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 DCLRE1CQ96SD1 692 aaKnown RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 NXF2Q9GZY0 626 aaKnown RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 SLC2A4RGQ9NR83 387 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 BABAM2Q9NXR7 383 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 UMODL1-AS1Q8N2C9 162 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OR51T1Q8NGJ9 327 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 MIB2Q96AX9 1013 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 HOXD1Q9GZZ0 328 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 A0A1W2PQU0 124 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 GABRPO00591 440 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 NME2P1O60361 137 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 SNRPEP62304 92 aaKnown RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OR1M1Q8NGA1 313 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OR4M1Q8NGD0 313 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 IGSF21Q96ID5 467 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 METTL15A6NJ78 407 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 M0R3H8 397 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 RNGTTO60942 597 aaKnown RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 THBS1P07996 1170 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 OSMP13725 252 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 TBCEQ15813 527 aaPredicted RBP8.15□□□□□ -1.1
CSMD1-216ENST00000602557 GPR137CQ8N3F9 429 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 PRRT1Q99946 306 aa8.15□□□□□ -1.1
CSMD1-216ENST00000602557 AQP7O14520 342 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 SURF4O15260 269 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 NTF3P20783 257 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 KIAA0319Q5VV43 1072 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 SLX4IPQ5VYV7 408 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 OR4K5Q8NGD3 323 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 RBMXL1Q96E39 390 aaKnown RBP8.15□□□□□ -1.11
CSMD1-216ENST00000602557 C1orf226A1L170 272 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 DCTN6O00399 190 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 KIAA0355O15063 1070 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 SEC14L5O43304 696 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 ZMAT1Q5H9K5 638 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 SKA3Q8IX90 412 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 DAZLQ92904 295 aaKnown RBP8.15□□□□□ -1.11
CSMD1-216ENST00000602557 YIPF5Q969M3 257 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 TMEM19Q96HH6 336 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 SPHK2Q9NRA0 654 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 KCNIP1Q9NZI2 227 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 V9GYS6 101 aa8.15□□□□□ -1.11
CSMD1-216ENST00000602557 NCOR1O75376 2440 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms