RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ZSWIM7Q19AV6 140 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 KLHL24Q6TFL4 600 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 TRMT10CQ7L0Y3 403 aaKnown RBP14.6□□□□□ -0.07
USE1-208ENST00000600970 GRINAQ7Z429 371 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 SPATA19Q7Z5L4 167 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 LSRQ86X29 649 aaPredicted RBP14.6□□□□□ -0.07
USE1-208ENST00000600970 DDIASQ8IXT1 998 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 NATD1Q8N6N6 113 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 CCDC63Q8NA47 563 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 BHLHE41Q9C0J9 482 aaPredicted RBP14.6□□□□□ -0.07
USE1-208ENST00000600970 ZNF350Q9GZX5 532 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 ATAD3AQ9NVI7 634 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 TMEM181Q9P2C4 612 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 TRAPPC4Q9Y296 219 aa14.6□□□□□ -0.07
USE1-208ENST00000600970 DUXAA6NLW8 204 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 KLF11O14901 512 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 CFLARO15519 480 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 LILRA1O75019 489 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 TACSTD2P09758 323 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 CCNA2P20248 432 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 FKBP2P26885 142 aaKnown RBP14.59□□□□□ -0.07
USE1-208ENST00000600970 MAPK1P28482 360 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 RYKP34925 604 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 SOAT1P35610 550 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 CHN2P52757 468 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 HBA1P69905 142 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 SLC17A1Q14916 467 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 ADIPOQQ15848 244 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 UGT3A2Q3SY77 523 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 HIKESHIQ53FT3 197 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 C6orf120Q7Z4R8 191 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 C10orf107Q8IVU9 208 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 LINC01356Q8N9X3 169 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 TWIST2Q8WVJ9 160 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 BOD1Q96IK1 185 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 GATA5Q9BWX5 397 aaPredicted RBP14.59□□□□□ -0.07
USE1-208ENST00000600970 PLK3Q9H4B4 646 aa14.59□□□□□ -0.07
USE1-208ENST00000600970 TMEM233B4DJY2 109 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 PIP5K1BO14986 540 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 PEX11AO75192 247 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 PDE5AO76074 875 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 VENTXO95231 258 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 OR4A8P0C604 315 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 IMPDH2P12268 514 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 CDH2P19022 906 aaPredicted RBP14.58□□□□□ -0.08
USE1-208ENST00000600970 GIFP27352 417 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 APEX1P27695 318 aaKnown RBP14.58□□□□□ -0.08
USE1-208ENST00000600970 CRHR1P34998 444 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 CCT5P48643 541 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 PPOXP50336 477 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 IDH3GP51553 393 aaPredicted RBP14.58□□□□□ -0.08
USE1-208ENST00000600970 EFNB3Q15768 340 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 EMBQ6PCB8 327 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 BHLHB9Q6PI77 547 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 CLEC4FQ8N1N0 589 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 KRTCAP2Q8N6L1 136 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 PPP3R2Q96LZ3 170 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 SLC38A2Q96QD8 506 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 KCNS3Q9BQ31 491 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 NAA11Q9BSU3 229 aaPredicted RBP14.58□□□□□ -0.08
USE1-208ENST00000600970 KATNB1Q9BVA0 655 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 RAB1BQ9H0U4 201 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 SLC35A3Q9Y2D2 325 aa14.58□□□□□ -0.08
USE1-208ENST00000600970 EIF1BO60739 113 aaKnown RBP14.57□□□□□ -0.08
USE1-208ENST00000600970 LYPLA1O75608 230 aaPredicted RBP14.57□□□□□ -0.08
USE1-208ENST00000600970 CHRNGP07510 517 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 FGF4P08620 206 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 DAOP14920 347 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 SLC35A1P78382 337 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 PLAURQ03405 335 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 WHAMMP3Q1A5X7 153 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 FAM174BQ3ZCQ3 159 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 TYW3Q6IPR3 259 aaKnown RBP14.57□□□□□ -0.08
USE1-208ENST00000600970 VHLLQ6RSH7 139 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 C16orf62Q7Z3J2 963 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 RIMKLAQ8IXN7 391 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 CNPY4Q8N129 248 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 HPS1Q92902 700 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 TMEM45BQ96B21 275 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 SLC35G5Q96KT7 338 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 PRPF18Q99633 342 aaKnown RBP14.57□□□□□ -0.08
USE1-208ENST00000600970 C1orf50Q9BV19 199 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 DUSP26Q9BV47 211 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 METRNQ9UJH8 293 aa14.57□□□□□ -0.08
USE1-208ENST00000600970 TMED7-TICAM2A0A0A6YYA0 188 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 CRYAAP02489 173 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 IDH2P48735 452 aaKnown RBP14.56□□□□□ -0.08
USE1-208ENST00000600970 CDH15P55291 814 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 PCLAFQ15004 111 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 TBRG1Q3YBR2 411 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 XKR7Q5GH72 579 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 AP1ARQ63HQ0 302 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 CLECL1Q8IZS7 167 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 ZIC4Q8N9L1 334 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 POMGNT2Q8NAT1 580 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 SEMA6DQ8NFY4 1073 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 OIT3Q8WWZ8 545 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 DDIT4LQ96D03 193 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 ZNF385AQ96PM9 386 aaKnown RBP14.56□□□□□ -0.08
USE1-208ENST00000600970 SNX18Q96RF0 628 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms