RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 UPB1Q9UBR1 384 aa18.57■□□□□ 0.56
PNKP-212ENST00000599454 SLC9A8Q9Y2E8 581 aa18.57■□□□□ 0.56
PNKP-212ENST00000599454 ATP23Q9Y6H3 246 aa18.57■□□□□ 0.56
PNKP-212ENST00000599454 TLDC2A0PJX2 215 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 EIF1BO60739 113 aaKnown RBP18.56■□□□□ 0.56
PNKP-212ENST00000599454 NUDT17P0C025 328 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 OR12D1P0DN82 309 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 USF1P22415 310 aaPredicted RBP18.56■□□□□ 0.56
PNKP-212ENST00000599454 UQCRC2P22695 453 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 APOBEC3AP31941 199 aaPredicted RBP18.56■□□□□ 0.56
PNKP-212ENST00000599454 ARRB2P32121 409 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 RYKP34925 604 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 OR2B6P58173 313 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 SLC35A1P78382 337 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 H3F3AP84243 136 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 EMBQ6PCB8 327 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 CASP12Q6UXS9 341 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 OLIG3Q7RTU3 272 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 ADGRG3Q86Y34 549 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 CCDC103Q8IW40 242 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 CLEC4FQ8N1N0 589 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 ARFGAP2Q8N6H7 521 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 WDR31Q8NA23 367 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 VPS37AQ8NEZ2 397 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 OR4A15Q8NGL6 344 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 XAGE5Q8WWM1 108 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 PMM1Q92871 262 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 ROPN1LQ96C74 230 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 NAA11Q9BSU3 229 aaPredicted RBP18.56■□□□□ 0.56
PNKP-212ENST00000599454 SHARPINQ9H0F6 387 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 SLC17A5Q9NRA2 495 aa18.56■□□□□ 0.56
PNKP-212ENST00000599454 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.56■□□□□ 0.56
PNKP-212ENST00000599454 ZNF208O43345 1280 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 IGHV4-31P0DP07 118 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 GZMKP49863 264 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 KHKP50053 298 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 MAP2K6P52564 334 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 PHC1P78364 1004 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 KCNJ10P78508 379 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 FRRS1Q6ZNA5 592 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 OR52E4Q8NGH9 312 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 TCP10LQ8TDR4 215 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 HTRA1Q92743 480 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 DDIT4LQ96D03 193 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 OR11A1Q9GZK7 315 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 FLVCR1Q9Y5Y0 555 aa18.55■□□□□ 0.56
PNKP-212ENST00000599454 LMX1BO60663 402 aa18.54■□□□□ 0.56
PNKP-212ENST00000599454 BCAS1O75363 584 aaPredicted RBP18.54■□□□□ 0.56
PNKP-212ENST00000599454 FOXG1P55316 489 aaPredicted RBP18.54■□□□□ 0.56
PNKP-212ENST00000599454 LSM11P83369 360 aaKnown RBP eCLIP18.54■□□□□ 0.56
PNKP-212ENST00000599454 HPCAP84074 193 aa18.54■□□□□ 0.56
PNKP-212ENST00000599454 ANXA8L1Q5VT79 327 aa18.54■□□□□ 0.56
PNKP-212ENST00000599454 TNFAIP8L2Q6P589 184 aaPredicted RBP18.54■□□□□ 0.56
PNKP-212ENST00000599454 CMIPQ8IY22 773 aa18.54■□□□□ 0.56
PNKP-212ENST00000599454 C1QTNF6Q9BXI9 259 aa18.54■□□□□ 0.56
PNKP-212ENST00000599454 FKBP7Q9Y680 259 aa18.54■□□□□ 0.56
PNKP-212ENST00000599454 NBEAL1Q6ZS30 2694 aa18.54■□□□□ 0.56
PNKP-212ENST00000599454 TMED7-TICAM2A0A0A6YYA0 188 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 PRSS51A0A1B0GVH4 220 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 NDUFS8O00217 210 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 SPAG7O75391 227 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 WNT11O96014 354 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 ZNF16P17020 682 aaPredicted RBP18.53■□□□□ 0.56
PNKP-212ENST00000599454 IDH2P48735 452 aaKnown RBP18.53■□□□□ 0.56
PNKP-212ENST00000599454 POLR2HP52434 150 aaKnown RBP18.53■□□□□ 0.56
PNKP-212ENST00000599454 PRPS1P60891 318 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 FUT5Q11128 374 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 SAXO2Q658L1 398 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 KLHL24Q6TFL4 600 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 RAB8BQ92930 207 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 NEURL3Q96EH8 262 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 DNAJA3Q96EY1 480 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 DPY30Q9C005 99 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 SLC7A10Q9NS82 523 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 LGALS13Q9UHV8 139 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 TMED7Q9Y3B3 224 aa18.53■□□□□ 0.56
PNKP-212ENST00000599454 SCN2BO60939 215 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 BPGMP07738 259 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 PAX7P23759 505 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 MPGP29372 298 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 PDLIM4P50479 330 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 SLC17A1Q14916 467 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 DPY19L1Q2PZI1 675 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 GPAT3Q53EU6 434 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 PAQR6Q6TCH4 344 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 TMEM45BQ96B21 275 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 TESCQ96BS2 214 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 ZG16BQ96DA0 208 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 PIF1Q9H611 641 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 OBP2BQ9NPH6 170 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 KCNS2Q9ULS6 477 aa18.52■□□□□ 0.56
PNKP-212ENST00000599454 VWC2LB2RUY7 222 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 FAAHO00519 579 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 CPSF4O95639 269 aaKnown RBP18.51■□□□□ 0.55
PNKP-212ENST00000599454 UQCRBP14927 111 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 SRD5A1P18405 259 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 CCNA2P20248 432 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 TXNL4AP83876 142 aaKnown RBP18.51■□□□□ 0.55
PNKP-212ENST00000599454 PLAURQ03405 335 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 SWI5Q1ZZU3 235 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms