RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MVDP53602 400 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 RASGEF1BQ0VAM2 473 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 ACKR1Q16570 336 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 SYT14P1Q58G82 188 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 AP1ARQ63HQ0 302 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 LRRC74BQ6ZQY2 392 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 TMPPEQ6ZT21 453 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 ATG4DQ86TL0 474 aaPredicted RBP12.21□□□□□ -0.45
SCAF1-203ENST00000598359 GABRG1Q8N1C3 465 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 RP9Q8TA86 221 aaKnown RBP12.21□□□□□ -0.45
SCAF1-203ENST00000598359 WDR60Q8WVS4 1066 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 MCUR1Q96AQ8 359 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 ARL5BQ96KC2 179 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 GSX1Q9H4S2 264 aaPredicted RBP12.21□□□□□ -0.45
SCAF1-203ENST00000598359 SDR39U1Q9NRG7 319 aaPredicted RBP12.21□□□□□ -0.45
SCAF1-203ENST00000598359 RLIMQ9NVW2 624 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 ZIM2Q9NZV7 527 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 LIPT1Q9Y234 373 aa12.21□□□□□ -0.45
SCAF1-203ENST00000598359 CYTIPO60759 359 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 RAMP1O60894 148 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 ANP32DO95626 131 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 KRT75O95678 551 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 PPP3CBP16298 524 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 PSMB1P20618 241 aaKnown RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 HOXC12P31275 282 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 APOBEC1P41238 236 aaKnown RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 CRATP43155 626 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 MRPL19P49406 292 aaKnown RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 NKX6-1P78426 367 aaPredicted RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 GSTA3Q16772 222 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 RPS26P11Q5JNZ5 115 aaPredicted RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 C6orf10Q5SRN2 563 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 MRPL2Q5T653 305 aaKnown RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 SLC2A7Q6PXP3 512 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 GRINAQ7Z429 371 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 VRK2Q86Y07 508 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 ADGRG3Q86Y34 549 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 MIER2Q8N344 545 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 SLC43A2Q8N370 569 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 PLPPR2Q96GM1 343 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 CCL19Q99731 98 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 DENND2DQ9H6A0 471 aaPredicted RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 MTHFD2LQ9H903 347 aaPredicted RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 BCO1Q9HAY6 547 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 EXOSC3Q9NQT5 275 aaKnown RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 BEX4Q9NWD9 120 aaPredicted RBP12.2□□□□□ -0.46
SCAF1-203ENST00000598359 KLHL9Q9P2J3 617 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 CHRNA9Q9UGM1 479 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 GPR52Q9Y2T5 361 aa12.2□□□□□ -0.46
SCAF1-203ENST00000598359 TMED7-TICAM2A0A0A6YYA0 188 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 TMEM72A0PK05 275 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 LYZL6O75951 148 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 IGHV3-9P01782 118 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 BCHEP06276 602 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 GKN3PP0CG01 181 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 IL7RP16871 459 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 RPS4Y1P22090 263 aaKnown RBP12.19□□□□□ -0.46
SCAF1-203ENST00000598359 IL32P24001 234 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 OR3A2P47893 321 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 ANXA11P50995 505 aaKnown RBP12.19□□□□□ -0.46
SCAF1-203ENST00000598359 OR2B6P58173 313 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 LRRC74AQ0VAA2 488 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 SQLEQ14534 574 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 BEX5Q5H9J7 111 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 SFRP5Q5T4F7 317 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 PGM2L1Q6PCE3 622 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 ZNF704Q6ZNC4 412 aaPredicted RBP12.19□□□□□ -0.46
SCAF1-203ENST00000598359 NET1Q7Z628 596 aaPredicted RBP12.19□□□□□ -0.46
SCAF1-203ENST00000598359 CCDC103Q8IW40 242 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 STEAP2Q8NFT2 490 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 SLC25A43Q8WUT9 341 aaPredicted RBP12.19□□□□□ -0.46
SCAF1-203ENST00000598359 OIT3Q8WWZ8 545 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 NANOS1Q8WY41 292 aaKnown RBP12.19□□□□□ -0.46
SCAF1-203ENST00000598359 ITCHQ96J02 903 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 TPT1P8Q9HAU6 139 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 GP6Q9HCN6 339 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 FANCFQ9NPI8 374 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 DLL4Q9NR61 685 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 P2RX2Q9UBL9 471 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 OSGIN1Q9UJX0 560 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 TMED7Q9Y3B3 224 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
SCAF1-203ENST00000598359 FREM1Q5H8C1 2179 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 ZC3H12DA2A288 527 aaKnown RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 FAM234BA2RU67 622 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 SMPD2O60906 423 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 DBIP07108 87 aaKnown RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 NUDT7P0C024 238 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 TACR3P29371 465 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 NTF4P34130 210 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 DSTNP60981 165 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 CSNK2A1P68400 391 aaPredicted RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 EPS8Q12929 822 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 CAPRIN1Q14444 709 aaKnown RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 MAPRE2Q15555 327 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 TAB1Q15750 504 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 STK11Q15831 433 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
SCAF1-203ENST00000598359 ABLIM2Q6H8Q1 611 aa12.18□□□□□ -0.46
SCAF1-203ENST00000598359 ZNF836Q6ZNA1 936 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms