RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 HOXC5Q00444 222 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 FOXF2Q12947 444 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 MYBPHQ13203 477 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 GUSBP1Q15486 140 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 FBXL19-AS1Q494R0 122 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 SPATS1Q496A3 300 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 C5orf46Q6UWT4 87 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 FCRLAQ7L513 359 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 MCEMP1Q8IX19 187 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 GCNT2Q8N0V5 402 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 RELL2Q8NC24 303 aaPredicted RBP23.05■■□□□ 1.28
TRIM28-204ENST00000594806 STK35Q8TDR2 534 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 RNF128Q8TEB7 428 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 LZICQ8WZA0 190 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 TACO1Q9BSH4 297 aaKnown RBP23.05■■□□□ 1.28
TRIM28-204ENST00000594806 ADA2Q9NZK5 511 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 SELENONQ9NZV5 590 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 COL12A1Q99715 3063 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 NKX2-6A6NCS4 301 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 TNFSF13O75888 250 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 PLGP00747 810 aaPredicted RBP23.04■■□□□ 1.28
TRIM28-204ENST00000594806 CCNA2P20248 432 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 HTR2AP28223 471 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 AGFG1P52594 562 aaKnown RBP23.04■■□□□ 1.28
TRIM28-204ENST00000594806 TFF3Q07654 80 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 SWT1Q5T5J6 900 aaKnown RBP23.04■■□□□ 1.28
TRIM28-204ENST00000594806 SP5Q6BEB4 398 aaPredicted RBP23.04■■□□□ 1.28
TRIM28-204ENST00000594806 FAM214BQ7L5A3 538 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 SLC47A1Q96FL8 570 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 ARL5BQ96KC2 179 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 OR11A1Q9GZK7 315 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 JKAMPQ9P055 326 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 PACSIN3Q9UKS6 424 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 EMC9Q9Y3B6 208 aa23.04■■□□□ 1.28
TRIM28-204ENST00000594806 A0A1B0GWA3 101 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 ELOA3DA6NLF2 546 aaPredicted RBP23.03■■□□□ 1.28
TRIM28-204ENST00000594806 CXCR6O00574 342 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 EIF1BO60739 113 aaKnown RBP23.03■■□□□ 1.28
TRIM28-204ENST00000594806 SS18L1O75177 396 aaPredicted RBP23.03■■□□□ 1.28
TRIM28-204ENST00000594806 PRKD3O94806 890 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 CALB2P22676 271 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 PEX19P40855 299 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 KIR2DL2P43627 348 aaPredicted RBP23.03■■□□□ 1.28
TRIM28-204ENST00000594806 SELENOWP63302 87 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 SLC35A1P78382 337 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 MXRA7P84157 204 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 OR1Q1Q15612 314 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 ELOA3BQ3SY89 546 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 LRRC23Q53EV4 343 aaPredicted RBP23.03■■□□□ 1.28
TRIM28-204ENST00000594806 ALG10BQ5I7T1 473 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 ZNF613Q6PF04 617 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 ELOA3Q8NG57 546 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 SLC38A4Q969I6 547 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 MCHR1Q99705 422 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 PCDHAC1Q9H158 963 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 KLHL9Q9P2J3 617 aa23.03■■□□□ 1.28
TRIM28-204ENST00000594806 A0A0B4J2E0 115 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 A0A1B0GX12 115 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 TMEM229AB2RXF0 380 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 M0R3H8 397 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 MSTNO14793 375 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 CTBP2P56545 445 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 CYBRD1Q53TN4 286 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 SAMD4BQ5PRF9 694 aaKnown RBP23.02■■□□□ 1.28
TRIM28-204ENST00000594806 CNEP1R1Q8N9A8 125 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 OR6T1Q8NGN1 323 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 ROBO4Q8WZ75 1007 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 STARD4Q96DR4 205 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 POLR2J2Q9GZM3 115 aaKnown RBP23.02■■□□□ 1.28
TRIM28-204ENST00000594806 POLR2J3Q9H1A7 115 aaKnown RBP23.02■■□□□ 1.28
TRIM28-204ENST00000594806 ADPRHL2Q9NX46 363 aa23.02■■□□□ 1.28
TRIM28-204ENST00000594806 TPST2O60704 377 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 CYTIPO60759 359 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 NPIPB7O75200 414 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 GMNNO75496 209 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 GPIP06744 558 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 HSD17B1P14061 328 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 IDUAP35475 653 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 SLC25A3Q00325 362 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 PDK3Q15120 406 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 TRPM8Q7Z2W7 1104 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 OR6K3Q8NGY3 331 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 WFDC6Q9BQY6 131 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 NAA11Q9BSU3 229 aaPredicted RBP23.01■■□□□ 1.27
TRIM28-204ENST00000594806 SLC24A3Q9HC58 644 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 SH3GLB1Q9Y371 365 aa23.01■■□□□ 1.27
TRIM28-204ENST00000594806 B2RBV5 119 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 CD8BP10966 210 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 GGT1P19440 569 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 GRNP28799 593 aaKnown RBP23■■□□□ 1.27
TRIM28-204ENST00000594806 PCYT1AP49585 367 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 OR2B6P58173 313 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 ACBD4Q8NC06 268 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 RNASE6Q93091 150 aaKnown RBP23■■□□□ 1.27
TRIM28-204ENST00000594806 SPOCK3Q9BQ16 436 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 TAPBPLQ9BX59 468 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 ENKD1Q9H0I2 346 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 BCO1Q9HAY6 547 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 HECTD1Q9ULT8 2610 aa23■■□□□ 1.27
TRIM28-204ENST00000594806 FLNBO75369 2602 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms