RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ST6GALNAC2Q9UJ37 374 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 A0A1B0GVI7 797 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 H0YGG7 62 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 K7EQS6 105 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 BRINP1O60477 761 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 CFDP00746 253 aaPredicted RBP15.2■□□□□ 0.02
LIG1-206ENST00000594067 ATP1B1P05026 303 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 ATF1P18846 271 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 KIR2DL1P43626 348 aaPredicted RBP15.2■□□□□ 0.02
LIG1-206ENST00000594067 EMDP50402 254 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 MMP15P51511 669 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 ARF3P61204 181 aaPredicted RBP15.2■□□□□ 0.02
LIG1-206ENST00000594067 KIR2DS3Q14952 304 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 PRICKLE4Q2TBC4 344 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 SDR9C7Q8NEX9 313 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 GIMAP1Q8WWP7 306 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 STACQ99469 402 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 ZNF559Q9BR84 538 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 RPP25Q9BUL9 199 aaKnown RBP15.2■□□□□ 0.02
LIG1-206ENST00000594067 CLEC4MQ9H2X3 399 aaPredicted RBP15.2■□□□□ 0.02
LIG1-206ENST00000594067 C12orf10Q9HB07 376 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 ACTR10Q9NZ32 417 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 PILRAQ9UKJ1 303 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 A0A087WV62 115 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 A0A0B4J2E0 115 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 A0A1B0GX12 115 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 UBL3O95164 117 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 RASGRP1O95267 797 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 GPR75O95800 540 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 H2AFB2P0C5Z0 115 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 PEPDP12955 493 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 ZNF10P21506 573 aaPredicted RBP15.19■□□□□ 0.02
LIG1-206ENST00000594067 RAG2P55895 527 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 TAGLNQ01995 201 aaKnown RBP15.19■□□□□ 0.02
LIG1-206ENST00000594067 PUDPQ08623 228 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 MGAT2Q10469 447 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 OR52E2Q8NGJ4 325 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 OR4K13Q8NH42 304 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 HAVCR2Q8TDQ0 301 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 FAM3CQ92520 227 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 NXPE2Q96DL1 559 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 ERMAPQ96PL5 475 aaPredicted RBP15.19■□□□□ 0.02
LIG1-206ENST00000594067 MCCC2Q9HCC0 563 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 TFP02787 698 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 CA3P07451 260 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 NAA10P41227 235 aaPredicted RBP15.19■□□□□ 0.02
LIG1-206ENST00000594067 CRYZQ08257 329 aaKnown RBP15.19■□□□□ 0.02
LIG1-206ENST00000594067 ZNF267Q14586 743 aaPredicted RBP15.19■□□□□ 0.02
LIG1-206ENST00000594067 HSD17B12Q53GQ0 312 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 TMEM196Q5HYL7 178 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 ZNF613Q6PF04 617 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 DGAT2L6Q6ZPD8 337 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 BTN2A1Q7KYR7 527 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 PIAS4Q8N2W9 510 aaPredicted RBP15.19■□□□□ 0.02
LIG1-206ENST00000594067 FAM98AQ8NCA5 519 aaKnown RBP15.19■□□□□ 0.02
LIG1-206ENST00000594067 THAP4Q8WY91 577 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 CDCP1Q9H5V8 836 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 IGFLR1Q9H665 355 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 BRD7Q9NPI1 651 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 STARD5Q9NSY2 213 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 UBQLN2Q9UHD9 624 aa15.19■□□□□ 0.02
LIG1-206ENST00000594067 G3V3Q6 166 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 TNFSF14O43557 240 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 HPXP02790 462 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 RRASP10301 218 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 ZP1P60852 638 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 GPR18Q14330 331 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 RTL4Q6ZR62 310 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 IZUMO1Q8IYV9 350 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 MS4A15Q8N5U1 240 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 CEP76Q8TAP6 659 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 RERGQ96A58 199 aaPredicted RBP15.18■□□□□ 0.02
LIG1-206ENST00000594067 ZFYVE21Q9BQ24 234 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 ORAI3Q9BRQ5 295 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 GSDMCQ9BYG8 508 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 LYRM4Q9HD34 91 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 CD93Q9NPY3 652 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 SCP2D1Q9UJQ7 156 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 XIRP2A4UGR9 3374 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 CYR61O00622 381 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 COL9A1P20849 921 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 DRD5P21918 477 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 SLC6A6P31641 620 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 LSSP48449 732 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 ACTC1P68032 377 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 ACTA1P68133 377 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 FHL1Q13642 323 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 ITPRIPL2Q3MIP1 535 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 PRSS45Q7RTY3 260 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 CMIPQ8IY22 773 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 OR52R1Q8NGF1 315 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 PHOSPHO2Q8TCD6 241 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 PATE1Q8WXA2 126 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 HAO2Q9NYQ3 351 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 AK6Q9Y3D8 172 aaKnown RBP15.18■□□□□ 0.02
LIG1-206ENST00000594067 NPFFR2Q9Y5X5 522 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 SPACA6W5XKT8 324 aa15.18■□□□□ 0.02
LIG1-206ENST00000594067 REV3LO60673 3130 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 ZNF593O00488 134 aaPredicted RBP15.17■□□□□ 0.02
LIG1-206ENST00000594067 IFNGP01579 166 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms