RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 GRINAQ7Z429 371 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 ROPN1LQ96C74 230 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 SHARPINQ9H0F6 387 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 SLC7A10Q9NS82 523 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 TMEM160Q9NX00 188 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 UPB1Q9UBR1 384 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 SLC35A3Q9Y2D2 325 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 PDLIM1O00151 329 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 AP3D1O14617 1153 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 LMX1BO60663 402 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 C1QCP02747 245 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 USF1P22415 310 aaPredicted RBP15.3■□□□□ 0.04
RETREG3-212ENST00000593251 IDH2P48735 452 aaKnown RBP15.3■□□□□ 0.04
RETREG3-212ENST00000593251 CHRNB3Q05901 458 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 ATAD3BQ5T9A4 648 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 TSPO2Q5TGU0 170 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 ARFGAP2Q8N6H7 521 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 MIPOL1Q8TD10 442 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 CNOT9Q92600 299 aaKnown RBP15.3■□□□□ 0.04
RETREG3-212ENST00000593251 PROX1Q92786 737 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 FBXO17Q96EF6 278 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 AMBRA1Q9C0C7 1298 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 CHODLQ9H9P2 273 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 FKRPQ9H9S5 495 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 SLC17A5Q9NRA2 495 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 NOP53Q9NZM5 478 aaKnown RBP15.3■□□□□ 0.04
RETREG3-212ENST00000593251 TMEM181Q9P2C4 612 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 PCDHGB4Q9UN71 923 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 FLVCR1Q9Y5Y0 555 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 PMF1-BGLAPU3KQ54 211 aa15.3■□□□□ 0.04
RETREG3-212ENST00000593251 TMED7-TICAM2A0A0A6YYA0 188 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 TMEM72A0PK05 275 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 PRAMEF27A3QJZ7 478 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 RNASET2O00584 256 aaKnown RBP15.29■□□□□ 0.04
RETREG3-212ENST00000593251 DNPH1O43598 174 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 IMPDH2P12268 514 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 CDH2P19022 906 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-212ENST00000593251 IGFBP5P24593 272 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 APOBEC3AP31941 199 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-212ENST00000593251 PHC1P78364 1004 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 KCNJ10P78508 379 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 LSM11P83369 360 aaKnown RBP eCLIP15.29■□□□□ 0.04
RETREG3-212ENST00000593251 H3F3AP84243 136 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 EMX2Q04743 252 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 MAD2L1Q13257 205 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-212ENST00000593251 GGTLC2Q14390 218 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 PDCD2Q16342 344 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-212ENST00000593251 GPAT3Q53EU6 434 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 SAP130Q9H0E3 1048 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 LPAR3Q9UBY5 353 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 DCTN4Q9UJW0 460 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 MOKQ9UQ07 419 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 AMDHD2Q9Y303 409 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 TMED7Q9Y3B3 224 aa15.29■□□□□ 0.04
RETREG3-212ENST00000593251 ZC3H12DA2A288 527 aaKnown RBP15.28■□□□□ 0.04
RETREG3-212ENST00000593251 SLC35F4A4IF30 521 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 SCN2BO60939 215 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 CSF3P09919 207 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 CREB1P16220 341 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 UQCRC2P22695 453 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 SERPINB5P36952 375 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 CLK1P49759 484 aaKnown RBP15.28■□□□□ 0.04
RETREG3-212ENST00000593251 EIF1ADQ8N9N8 165 aaKnown RBP15.28■□□□□ 0.04
RETREG3-212ENST00000593251 C3orf49Q96BT1 292 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 DPY30Q9C005 99 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 POLE3Q9NRF9 147 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-212ENST00000593251 ASIC5Q9NY37 505 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 OSGIN1Q9UJX0 560 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 TRAPPC4Q9Y296 219 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 SLC9A8Q9Y2E8 581 aa15.28■□□□□ 0.04
RETREG3-212ENST00000593251 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 KLF11O14901 512 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 ITM2AO43736 263 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 AGR2O95994 175 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 BPGMP07738 259 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 BMP4P12644 408 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 SRD5A1P18405 259 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 KHKP50053 298 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 SLC35A1P78382 337 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 SLC17A1Q14916 467 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 CARTPTQ16568 116 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 MST1LQ2TV78 715 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 HIKESHIQ53FT3 197 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 SAXO2Q658L1 398 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 C17orf78Q8N4C9 275 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 C1orf162Q8NEQ5 155 aaPredicted RBP15.27■□□□□ 0.04
RETREG3-212ENST00000593251 OR8J2Q8NGG1 315 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 DDIT4LQ96D03 193 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 SORCS2Q96PQ0 1159 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 NAA11Q9BSU3 229 aaPredicted RBP15.27■□□□□ 0.04
RETREG3-212ENST00000593251 C19orf24Q9BVV8 132 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 PRR14Q9BWN1 585 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 AKTIPQ9H8T0 292 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 EXOSC3Q9NQT5 275 aaKnown RBP15.27■□□□□ 0.04
RETREG3-212ENST00000593251 PARPBPQ9NWS1 579 aa15.27■□□□□ 0.04
RETREG3-212ENST00000593251 MARCOQ9UEW3 520 aaPredicted RBP15.27■□□□□ 0.04
RETREG3-212ENST00000593251 LOC100289279A0A1B0GTE1 492 aa15.26■□□□□ 0.03
RETREG3-212ENST00000593251 VWC2LB2RUY7 222 aa15.26■□□□□ 0.03
RETREG3-212ENST00000593251 GUSBP08236 651 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms