RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 HPGDP15428 266 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 HIST1H1CP16403 213 aaKnown RBP18.02■□□□□ 0.48
CLIP3-206ENST00000593074 GLYR1Q49A26 553 aaPredicted RBP18.02■□□□□ 0.48
CLIP3-206ENST00000593074 DDI2Q5TDH0 399 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 TMEM91Q6ZNR0 172 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 KANSL1Q7Z3B3 1105 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 GPALPP1Q8IXQ4 340 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 GATSQ8NAP1 163 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 NEIL3Q8TAT5 605 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 SRRQ9GZT4 340 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 ZNF768Q9H5H4 540 aaKnown RBP18.02■□□□□ 0.48
CLIP3-206ENST00000593074 SIRT4Q9Y6E7 314 aaPredicted RBP18.02■□□□□ 0.48
CLIP3-206ENST00000593074 A0A1B0GTQ1 180 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 GTPBP1O00178 669 aaKnown RBP18.02■□□□□ 0.47
CLIP3-206ENST00000593074 CASKO14936 926 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 OIP5O43482 229 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 RGS9O75916 674 aaPredicted RBP18.02■□□□□ 0.47
CLIP3-206ENST00000593074 MT-ND5P03915 603 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 MRPL3P09001 348 aaKnown RBP18.02■□□□□ 0.47
CLIP3-206ENST00000593074 PNMTP11086 282 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 PNLIPP16233 465 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 ACTC1P68032 377 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 ACTA1P68133 377 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 NR0B2Q15466 257 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 YOD1Q5VVQ6 348 aaPredicted RBP18.02■□□□□ 0.47
CLIP3-206ENST00000593074 TMEM71Q6P5X7 295 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 APOOLQ6UXV4 268 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 DPY19L2P2Q6ZN68 376 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 ATG4DQ86TL0 474 aaPredicted RBP18.02■□□□□ 0.47
CLIP3-206ENST00000593074 OR52E2Q8NGJ4 325 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 ZNF501Q96CX3 271 aaPredicted RBP18.02■□□□□ 0.47
CLIP3-206ENST00000593074 C14orf119Q9NWQ9 140 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 MRTO4Q9UKD2 239 aaKnown RBP18.02■□□□□ 0.47
CLIP3-206ENST00000593074 ZMIZ1Q9ULJ6 1067 aa18.02■□□□□ 0.47
CLIP3-206ENST00000593074 A0A1B0GX78 115 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 SHISA3A0PJX4 238 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 CPED1A4D0V7 1026 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 LRRN3E7EW58 273 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 TOX3O15405 576 aaPredicted RBP18.01■□□□□ 0.47
CLIP3-206ENST00000593074 GYPBP06028 91 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 CD53P19397 219 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 ZXDAP98168 799 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 ZNF85Q03923 595 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 INSL4Q14641 139 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 SDR9C7Q8NEX9 313 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 PHOSPHO1Q8TCT1 267 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 SMPDL3BQ92485 455 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 TMEM43Q9BTV4 400 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 LRRN3Q9H3W5 708 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 IER3IP1Q9Y5U9 82 aa18.01■□□□□ 0.47
CLIP3-206ENST00000593074 SMIM30A4D0T7 59 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 CD8B2A6NJW9 211 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 DLGAP3O95886 979 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 CD8BP10966 210 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 LCN1P31025 176 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 CAPZA2P47755 286 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 DCAF7P61962 342 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 GGTLC2Q14390 218 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 EBPQ15125 230 aaKnown RBP18■□□□□ 0.47
CLIP3-206ENST00000593074 ISXQ2M1V0 245 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ZMAT1Q5H9K5 638 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 FAAH2Q6GMR7 532 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 FAM98AQ8NCA5 519 aaKnown RBP18■□□□□ 0.47
CLIP3-206ENST00000593074 OR4K13Q8NH42 304 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 MAFAQ8NHW3 353 aaPredicted RBP18■□□□□ 0.47
CLIP3-206ENST00000593074 SETD6Q8TBK2 473 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 SAP25Q8TEE9 199 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 PIGKQ92643 395 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 TMCO6Q96DC7 493 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ART5Q96L15 291 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 GPX7Q96SL4 187 aaPredicted RBP18■□□□□ 0.47
CLIP3-206ENST00000593074 NUDT9Q9BW91 350 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 KCNN2Q9H2S1 579 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 PRMT8Q9NR22 394 aaPredicted RBP18■□□□□ 0.47
CLIP3-206ENST00000593074 TBC1D24Q9ULP9 559 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ELOA3DA6NLF2 546 aaPredicted RBP18■□□□□ 0.47
CLIP3-206ENST00000593074 ARPC3O15145 178 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ZNF264O43296 627 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 TDGF1P13385 188 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 SPNP16150 400 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 TAS2R43P59537 309 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 HLA-BQ31612 363 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ELOA3BQ3SY89 546 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 VWA2Q5GFL6 755 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ARHGAP40Q5TG30 622 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 C1orf189Q5VU69 101 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 CBLN3Q6UW01 205 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 GDPD3Q7L5L3 318 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 C9orf40Q8IXQ3 194 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ELOA3Q8NG57 546 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 OR5W2Q8NH69 310 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 OR14A16Q8NHC5 309 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 LIPHQ8WWY8 451 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 NRIP3Q9NQ35 241 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ADAM18Q9Y3Q7 739 aa18■□□□□ 0.47
CLIP3-206ENST00000593074 ASXL3Q9C0F0 2248 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 LAMTOR5O43504 91 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 PLPP2O43688 288 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 MST1P26927 711 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 CAV3P56539 151 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms