RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 MAGIXQ9H6Y5 334 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 PTGES2Q9H7Z7 377 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 COQ10BQ9H8M1 238 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 NTN4Q9HB63 628 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 IL1RAPQ9NPH3 570 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 CCM2LQ9NUG4 571 aaPredicted RBP8.68□□□□□ -1.02
DDX39A-220ENST00000593008 RIMS3Q9UJD0 308 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 ACAD8Q9UKU7 415 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 TMED7Q9Y3B3 224 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 U3KQV3 271 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 KIAA1549Q9HCM3 1950 aa8.68□□□□□ -1.02
DDX39A-220ENST00000593008 TRAPPC13A5PLN9 417 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 ZNF814B7Z6K7 855 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 FAAHO00519 579 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 FMO6PO60774 539 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 OR5F1O95221 314 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 BMP7P18075 431 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 POU3F2P20265 443 aaPredicted RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 CBLP22681 906 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 MSX1P28360 303 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 SLC7A1P30825 629 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 LHX2P50458 406 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 POLR2HP52434 150 aaKnown RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 COPZ1P61923 177 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 CENPEQ02224 2701 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 SRYQ05066 204 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 CRYZQ08257 329 aaKnown RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 CDSNQ15517 529 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 CTU2Q2VPK5 515 aaKnown RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 FAM98BQ52LJ0 330 aaKnown RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 SLC25A53Q5H9E4 307 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 FGD3Q5JSP0 725 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 ZNF787Q6DD87 383 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 ZNF585AQ6P3V2 769 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 PIWIL3Q7Z3Z3 882 aaKnown RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 GRINAQ7Z429 371 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 RPRMLQ8N4K4 120 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 LSMEM1Q8N8F7 131 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 PAPD5Q8NDF8 572 aaKnown RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 OR9Q2Q8NGE9 314 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 ST8SIA1Q92185 356 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 ZBTB8AQ96BR9 441 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 KTI12Q96EK9 354 aaPredicted RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 ZNF845Q96IR2 970 aaPredicted RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 DHRS1Q96LJ7 313 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 GPA33Q99795 319 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 FUZQ9BT04 418 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 PTDSS2Q9BVG9 487 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 SRXN1Q9BYN0 137 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 TRIM2Q9C040 744 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 NMNAT1Q9HAN9 279 aaPredicted RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 TMEM27Q9HBJ8 222 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 S100A14Q9HCY8 104 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 PLSCR2Q9NRY7 297 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 PNPLA3Q9NST1 481 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 C20orf141Q9NUB4 165 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 STOML1Q9UBI4 398 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 RPS6KB2Q9UBS0 482 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 NKX1-2Q9UD57 310 aaPredicted RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 RRP15Q9Y3B9 282 aaKnown RBP8.67□□□□□ -1.02
DDX39A-220ENST00000593008 LYVE1Q9Y5Y7 322 aa8.67□□□□□ -1.02
DDX39A-220ENST00000593008 MYO7BQ6PIF6 2116 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 A0A087WZY1 265 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 TRGV5A0A0B4J1U4 118 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 IGHV3-15A0A0B4J1V0 119 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 A0A0J9YW62 118 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 C7orf72A4D263 438 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 SAC3D1A6NKF1 404 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 ELOA3DA6NLF2 546 aaPredicted RBP8.66□□□□□ -1.02
DDX39A-220ENST00000593008 FAM47E-STBD1D6RA91 191 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 PRSS44E7EML9 344 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 TNFSF11O14788 317 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 CHP2O43745 196 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 RAMP1O60894 148 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 IGHG3P01860 377 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 H1F0P07305 194 aaKnown RBP8.66□□□□□ -1.02
DDX39A-220ENST00000593008 IMPDH2P12268 514 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 ZNF17P17021 662 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 RHCEP18577 417 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 GRNP28799 593 aaKnown RBP8.66□□□□□ -1.02
DDX39A-220ENST00000593008 GPR4P46093 362 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 LIMS1P48059 325 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 DLX5P56178 289 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 CLDN18P56856 261 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 LTBQ06643 244 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 RCN1Q15293 331 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 SF3B4Q15427 424 aaKnown RBP eCLIP8.66□□□□□ -1.027e-6■□□□□ 9.4
DDX39A-220ENST00000593008 ZSWIM7Q19AV6 140 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 ELOA3BQ3SY89 546 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 EMC4Q5J8M3 183 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 MTFR2Q6P444 385 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 PODNL1Q6PEZ8 512 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 ZNF613Q6PF04 617 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 EPHX4Q8IUS5 362 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 NRMQ8IXM6 262 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 ELOA3Q8NG57 546 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 NEIL3Q8TAT5 605 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 SLC7A13Q8TCU3 470 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 SLC35B4Q969S0 331 aa8.66□□□□□ -1.02
DDX39A-220ENST00000593008 DUS3LQ96G46 650 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms