RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 APH1AQ96BI3 265 aa16.2■□□□□ 0.18
CIRBP-237ENST00000592234 ARL5BQ96KC2 179 aa16.2■□□□□ 0.18
CIRBP-237ENST00000592234 EXOSC3Q9NQT5 275 aaKnown RBP16.2■□□□□ 0.18
CIRBP-237ENST00000592234 CISD1Q9NZ45 108 aaKnown RBP16.2■□□□□ 0.18
CIRBP-237ENST00000592234 CIB4A0PJX0 185 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 PRAMEF27A3QJZ7 478 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 CLDN24A6NM45 220 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 ZNF716A6NP11 495 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 RNF223E7ERA6 249 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 HMGN4O00479 90 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 ABCD4O14678 606 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 RAMP1O60894 148 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 RAD51DO75771 328 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 PGM3O95394 542 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 H2AFXP16104 143 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-237ENST00000592234 CCNA2P20248 432 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 IDH2P48735 452 aaKnown RBP16.19■□□□□ 0.18
CIRBP-237ENST00000592234 CDH11P55287 796 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 FBXW9Q5XUX1 488 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 AP1ARQ63HQ0 302 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 EPGNQ6UW88 154 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 TRIML2Q8N7C3 387 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 MAPK1IP1LQ8NDC0 245 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 C7orf26Q96N11 449 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 OR11A1Q9GZK7 315 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 FAIMQ9NVQ4 179 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 NPAP1Q9NZP6 1156 aa16.19■□□□□ 0.18
CIRBP-237ENST00000592234 PLCE1Q9P212 2302 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 OR5H1A6NKK0 313 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 CCT8L1PA6NM43 557 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 SHISA9B4DS77 424 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 RFXANKO14593 260 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 GPR171O14626 319 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 DNPH1O43598 174 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 HTR3AP46098 478 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 CLK1P49759 484 aaKnown RBP16.18■□□□□ 0.18
CIRBP-237ENST00000592234 ANXA11P50995 505 aaKnown RBP16.18■□□□□ 0.18
CIRBP-237ENST00000592234 OR2B6P58173 313 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 SYPL1Q16563 259 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 GSTA3Q16772 222 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 GTDC1Q4AE62 458 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 COX20Q5RI15 118 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 LSRQ86X29 649 aaPredicted RBP16.18■□□□□ 0.18
CIRBP-237ENST00000592234 ADGRG3Q86Y34 549 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 ANKFN1Q8N957 763 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 GLB1L3Q8NCI6 653 aaPredicted RBP16.18■□□□□ 0.18
CIRBP-237ENST00000592234 EBF4Q9BQW3 602 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 TRAF4Q9BUZ4 470 aaPredicted RBP16.18■□□□□ 0.18
CIRBP-237ENST00000592234 SLCO5A1Q9H2Y9 848 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 SLC6A13Q9NSD5 602 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 ZIM2Q9NZV7 527 aa16.18■□□□□ 0.18
CIRBP-237ENST00000592234 ABCA1O95477 2261 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 KIAA1324LA8MWY0 1029 aaPredicted RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 HMGB1P1B2RPK0 211 aaPredicted RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 POLR3GO15318 223 aaPredicted RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 ADAM11O75078 769 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 MRPL33O75394 65 aaKnown RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 ANP32DO95626 131 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 IL6P05231 212 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 ACVR1BP36896 505 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 MAGEA8P43361 318 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 PLAURQ03405 335 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 CCDC103Q8IW40 242 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 CMIPQ8IY22 773 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 MIER2Q8N344 545 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 OR52N5Q8NH56 324 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 CNOT9Q92600 299 aaKnown RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 VPS33AQ96AX1 596 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 DDIT4LQ96D03 193 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 THOC1Q96FV9 657 aaKnown RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 HS6ST2Q96MM7 605 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 TRNT1Q96Q11 434 aaKnown RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 REG4Q9BYZ8 158 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 SDR39U1Q9NRG7 319 aaPredicted RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 INTS9Q9NV88 658 aaKnown RBP16.17■□□□□ 0.18
CIRBP-237ENST00000592234 ASB6Q9NWX5 421 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 TMEM181Q9P2C4 612 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 TRAPPC4Q9Y296 219 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 ALPK2Q86TB3 2170 aa16.17■□□□□ 0.18
CIRBP-237ENST00000592234 TMED7-TICAM2A0A0A6YYA0 188 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 AP3D1O14617 1153 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 SASH3O75995 380 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 CD8AP01732 235 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 IGHV4-39P01824 125 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 CHRM4P08173 479 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 IDH3AP50213 366 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 POLR2JP52435 117 aaKnown RBP16.16■□□□□ 0.18
CIRBP-237ENST00000592234 SLC16A1P53985 500 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 TXNL4AP83876 142 aaKnown RBP16.16■□□□□ 0.18
CIRBP-237ENST00000592234 C6orf10Q5SRN2 563 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 TMEM108Q6UXF1 575 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 LRRC74BQ6ZQY2 392 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 DTX2Q86UW9 622 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 WDR60Q8WVS4 1066 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 RADILQ96JH8 1075 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 SLC38A1Q9H2H9 487 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 TCF7L2Q9NQB0 619 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 TAS2R16Q9NYV7 291 aa16.16■□□□□ 0.18
CIRBP-237ENST00000592234 MGAT4BQ9UQ53 548 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms