RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 THUMPD1Q9NXG2 353 aaKnown RBP8.41□□□□□ -1.06
BRCA1-226ENST00000591534 FLRT3Q9NZU0 649 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 CLEC4AQ9UMR7 237 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 GPR45Q9Y5Y3 372 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 FBN3Q75N90 2809 aa8.41□□□□□ -1.06
BRCA1-226ENST00000591534 A0A1W2PQD3 144 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 A0A1W2PRB8 838 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 ERICH4A6NGS2 130 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 C17orf51A8MQB3 221 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 B4DXG7 233 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 TNFSF11O14788 317 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 CLOCKO15516 846 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 TLX2O43763 284 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-226ENST00000591534 TBX19O60806 448 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 CIB2O75838 187 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 PRKD3O94806 890 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 NKX2-2O95096 273 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 OXSR1O95747 527 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-226ENST00000591534 ALOX5P09917 674 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 ATP6V1C1P21283 382 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 ELK4P28324 431 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 AGTR1P30556 359 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 S100A3P33764 101 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 PRIM2P49643 509 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 HSPB3Q12988 150 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 TNK1Q13470 666 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 CAPRIN1Q14444 709 aaKnown RBP8.4□□□□□ -1.06
BRCA1-226ENST00000591534 KIAA0040Q15053 153 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 CTU2Q2VPK5 515 aaKnown RBP8.4□□□□□ -1.06
BRCA1-226ENST00000591534 MAVSQ7Z434 540 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 GALNT10Q86SR1 603 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 LILRA2Q8N149 483 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 SLC43A2Q8N370 569 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 COX18Q8N8Q8 333 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 NUP43Q8NFH3 380 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 OR8J2Q8NGG1 315 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 B4GALNT2Q8NHY0 566 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 SMAP2Q8WU79 429 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-226ENST00000591534 IGFBPL1Q8WX77 278 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 PIK3R3Q92569 461 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 KISS1RQ969F8 398 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-226ENST00000591534 PPCDCQ96CD2 204 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 SPDL1Q96EA4 605 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 ITCHQ96J02 903 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 FCRL1Q96LA6 429 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 PPP1R36Q96LQ0 422 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 KLHL15Q96M94 604 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 HS6ST2Q96MM7 605 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 RNF145Q96MT1 663 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 ASPNQ9BXN1 380 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 RTN4RQ9BZR6 473 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 MUC13Q9H3R2 512 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 TPSG1Q9NRR2 321 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 ACSS1Q9NUB1 689 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-226ENST00000591534 MED17Q9NVC6 651 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 CCDC167Q9P0B6 97 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 U3KQE9 123 aa8.4□□□□□ -1.06
BRCA1-226ENST00000591534 MED12Q93074 2177 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 PCNX3Q9H6A9 2034 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 FN1P02751 2386 aaKnown RBP8.39□□□□□ -1.07
BRCA1-226ENST00000591534 GXYLT2A0PJZ3 443 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 DNAJC8O75937 253 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-226ENST00000591534 KCNK2O95069 426 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 NUDT14O95848 222 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 F13BP05160 661 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 YES1P07947 543 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 BCKDHAP12694 445 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 PLPPR5Q32ZL2 321 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 RFTN2Q52LD8 501 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF385BQ569K4 471 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 FAM209AQ5JX71 171 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 ANKRD26P1Q6NSI1 321 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 APOOLQ6UXV4 268 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 C22orf34Q6ZV56 151 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF551Q7Z340 670 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-226ENST00000591534 PGAM4Q8N0Y7 254 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 DPP10Q8N608 796 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 BVESQ8NE79 360 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 OR4C3Q8NH37 302 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 CLHC1Q8NHS4 586 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 HOXB13Q92826 284 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-226ENST00000591534 S100PBPQ96BU1 408 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 MOAP1Q96BY2 351 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 MUCL1Q96DR8 90 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 SH3YL1Q96HL8 342 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-226ENST00000591534 RADILQ96JH8 1075 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 ADGRG7Q96K78 797 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 REG4Q9BYZ8 158 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 TRIM15Q9C019 465 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF385DQ9H6B1 395 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 REEP4Q9H6H4 257 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 SPAG4Q9NPE6 437 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 FBXO34Q9NWN3 711 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 SH3BP4Q9P0V3 963 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 NTMQ9P121 344 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 KLHL9Q9P2J3 617 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 KLHL13Q9P2N7 655 aa8.39□□□□□ -1.07
BRCA1-226ENST00000591534 ARID1AO14497 2285 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 A0A0J9YW62 118 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms