RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 CCDC68Q9H2F9 335 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 ALG9Q9H6U8 611 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 CHODLQ9H9P2 273 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 ZMAT3Q9HA38 289 aaKnown RBP6.95□□□□□ -1.3
SMAD4-209ENST00000589941 IL1RL2Q9HB29 575 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 NTN4Q9HB63 628 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 LPAR3Q9UBY5 353 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 PSME2Q9UL46 239 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 ERVK-11Q9UQG0 969 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 MED16Q9Y2X0 877 aa6.95□□□□□ -1.3
SMAD4-209ENST00000589941 CCDC162PA2VCL2 907 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 FUOMA2VDF0 154 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 MBD3L3A6NE82 208 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-209ENST00000589941 LRRC3CA6NJW4 275 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 MAGEB17A8MXT2 336 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 H3BMM5 538 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ANKRD28O15084 1053 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 MAGEB3O15480 346 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 OR2J2O76002 312 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 CLPXO76031 633 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 NSA2O95478 260 aaKnown RBP6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ALPLP05186 524 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 HNRNPCP07910 306 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMAD4-209ENST00000589941 UROSP10746 265 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 CCNA2P20248 432 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ITGALP20701 1170 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 CRHBPP24387 322 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 AVPR1BP47901 424 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 SSR4P51571 173 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 BCAP31P51572 246 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 BMXP51813 675 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 FOXA1P55317 472 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 RPS3AP61247 264 aaKnown RBP6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ERVK-8P63133 956 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 OLR1P78380 273 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 PRAMEP78395 509 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 TMED1Q13445 227 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 KIAA0040Q15053 153 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 CYP51A1Q16850 503 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ANKDD1AQ495B1 522 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 FGD3Q5JSP0 725 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 FAM120AOSQ5T036 256 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 NDUFAF5Q5TEU4 345 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 GARNL3Q5VVW2 1013 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 MRNIPQ6NTE8 343 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 DLEU7Q6UYE1 221 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 VN1R4Q7Z5H5 301 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 SNX20Q7Z614 316 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 SLC22A15Q8IZD6 547 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 OR8J3Q8NGG0 315 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 MBD3L2Q8NHZ7 208 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-209ENST00000589941 GIPC3Q8TF64 312 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 MUL1Q969V5 352 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 TBC1D20Q96BZ9 403 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 VMP1Q96GC9 406 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 AURKBQ96GD4 344 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ZC3HAV1LQ96H79 300 aaKnown RBP6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF382Q96SR6 550 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 KCTD14Q9BQ13 255 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-209ENST00000589941 PSD2Q9BQI7 771 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 NEURL2Q9BR09 285 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 AIFM2Q9BRQ8 373 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 DEFB126Q9BYW3 111 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 TOR3AQ9H497 397 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 GORASP2Q9H8Y8 452 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 NANOGQ9H9S0 305 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 MID1IP1Q9NPA3 183 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 PFDN4Q9NQP4 134 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ASIC5Q9NY37 505 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF225Q9UK10 706 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 PCTPQ9UKL6 214 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 FBXW2Q9UKT8 454 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 BLOC1S6Q9UL45 172 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 LAMP3Q9UQV4 416 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 ERGIC3Q9Y282 383 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 DTX4Q9Y2E6 619 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 AP3M1Q9Y2T2 418 aa6.94□□□□□ -1.3
SMAD4-209ENST00000589941 RNF103-CHMP3A0A140T963 221 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SYCE1LA8MT33 242 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 A8MVJ9 347 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 E9PQ18 207 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 H0YIG0 161 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 M0QX08 132 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 KPNA5O15131 536 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 HCN1O60741 890 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 MRPS14O60783 128 aaKnown RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ATP6V1G1O75348 118 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 VPS26AO75436 327 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SLC22A3O75751 556 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 LRATO95237 230 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SNAP29O95721 258 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 GOT2P00505 430 aaKnown RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 TMIGD3P0DMS9 266 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 IGHV4-31P0DP07 118 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 THRBP10828 461 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 GGT1P19440 569 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 MAOAP21397 527 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 MATN1P21941 496 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 JAK1P23458 1154 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 IL12AP29459 219 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms