RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 ATP4BP51164 291 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 ATP5J2P56134 94 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 TIMM23BQ5SRD1 257 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 ABLIM2Q6H8Q1 611 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 SLC2A7Q6PXP3 512 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 RNF130Q86XS8 419 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 FUNDC1Q8IVP5 155 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 LILRB1Q8NHL6 650 aaPredicted RBP12.71□□□□□ -0.37
MBD1-220ENST00000589758 ZG16BQ96DA0 208 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 TRMT61AQ96FX7 289 aaKnown RBP12.71□□□□□ -0.37
MBD1-220ENST00000589758 ITCHQ96J02 903 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 MTHFD2LQ9H903 347 aaPredicted RBP12.71□□□□□ -0.37
MBD1-220ENST00000589758 SLC6A13Q9NSD5 602 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 LAMP3Q9UQV4 416 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 TRAPPC4Q9Y296 219 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 FREM1Q5H8C1 2179 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 TRIM64A6NGJ6 449 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 TRIM64BA6NI03 449 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 GPR171O14626 319 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 SMAD7O15105 426 aaKnown RBP12.7□□□□□ -0.38
MBD1-220ENST00000589758 LYZL6O75951 148 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 KRT75O95678 551 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 GGT1P19440 569 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 MRPL19P49406 292 aaKnown RBP12.7□□□□□ -0.38
MBD1-220ENST00000589758 MAP2K6P52564 334 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 PPA1Q15181 289 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 STK11Q15831 433 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 ZNF672Q499Z4 452 aaPredicted RBP12.7□□□□□ -0.38
MBD1-220ENST00000589758 GTDC1Q4AE62 458 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 BLOC1S3Q6QNY0 202 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 ADGRG3Q86Y34 549 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 PIGXQ8TBF5 258 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
MBD1-220ENST00000589758 SPDL1Q96EA4 605 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 ARL5BQ96KC2 179 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 SLC38A1Q9H2H9 487 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 TMEM181Q9P2C4 612 aa12.7□□□□□ -0.38
MBD1-220ENST00000589758 NOSIPQ9Y314 301 aaKnown RBP12.7□□□□□ -0.38
MBD1-220ENST00000589758 TMED7-TICAM2A0A0A6YYA0 188 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 AGAP5A6NIR3 686 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 FAAHO00519 579 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 ZNF208O43345 1280 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 EIF1BO60739 113 aaKnown RBP12.69□□□□□ -0.38
MBD1-220ENST00000589758 BCAS1O75363 584 aaPredicted RBP12.69□□□□□ -0.38
MBD1-220ENST00000589758 PGM3O95394 542 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 DBIP07108 87 aaKnown RBP12.69□□□□□ -0.38
MBD1-220ENST00000589758 DANCRP0C864 163 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 NR2F1P10589 423 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 UQCRBP14927 111 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 IL7RP16871 459 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 IGHV1-2P23083 117 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 SLC16A1P53985 500 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 BSPH1Q075Z2 132 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 ETFDHQ16134 617 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 SYPL1Q16563 259 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 FBXW9Q5XUX1 488 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 SEZ6L2Q6UXD5 910 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 MSANTD1Q6ZTZ1 278 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 ANKFN1Q8N957 763 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 SMAP2Q8WU79 429 aaPredicted RBP12.69□□□□□ -0.38
MBD1-220ENST00000589758 WDR60Q8WVS4 1066 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 STON2Q8WXE9 905 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 CNOT9Q92600 299 aaKnown RBP12.69□□□□□ -0.38
MBD1-220ENST00000589758 APH1AQ96BI3 265 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 DDIT4LQ96D03 193 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 AURKBQ96GD4 344 aaPredicted RBP12.69□□□□□ -0.38
MBD1-220ENST00000589758 RADILQ96JH8 1075 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
MBD1-220ENST00000589758 RABEP2Q9H5N1 569 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 CALML5Q9NZT1 146 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 TMED7Q9Y3B3 224 aa12.69□□□□□ -0.38
MBD1-220ENST00000589758 A0A1W2PP18 115 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 CIB4A0PJX0 185 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 DPRXA6NFQ7 191 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 OR5H1A6NKK0 313 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 ZNF716A6NP11 495 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 OVOL3O00110 214 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 MRPL33O75394 65 aaKnown RBP12.68□□□□□ -0.38
MBD1-220ENST00000589758 CHRM4P08173 479 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 RPS4Y1P22090 263 aaKnown RBP12.68□□□□□ -0.38
MBD1-220ENST00000589758 EDNRAP25101 427 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 SLC1A3P43003 542 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 POLR2HP52434 150 aaKnown RBP12.68□□□□□ -0.38
MBD1-220ENST00000589758 SEC24CP53992 1094 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 OR2B6P58173 313 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 SLC35A1P78382 337 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 PLAURQ03405 335 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 COX20Q5RI15 118 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 HMGN2P46Q86SG4 172 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 PEX5LQ8IYB4 626 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 ZNF440Q8IYI8 595 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 UBE2J2Q8N2K1 259 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 ZNF433Q8N7K0 673 aaPredicted RBP12.68□□□□□ -0.38
MBD1-220ENST00000589758 GTF2H4Q92759 462 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 GTPBP3Q969Y2 492 aaKnown RBP12.68□□□□□ -0.38
MBD1-220ENST00000589758 NAA11Q9BSU3 229 aaPredicted RBP12.68□□□□□ -0.38
MBD1-220ENST00000589758 TRIM2Q9C040 744 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms