RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CD8B2A6NJW9 211 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 CCL21O00585 134 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 CIB2O75838 187 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 AGFG2O95081 481 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 SYNGR4O95473 234 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 OPN1LWP04000 364 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 RHCEP18577 417 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 ATP6V1B2P21281 511 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 RAC3P60763 192 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 CHRNB3Q05901 458 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 NSUN5P2Q63ZY6 315 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 GTF2IRD2BQ6EKJ0 949 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 TMPPEQ6ZT21 453 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 GTF2IRD2Q86UP8 949 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 OR10D3Q8NH80 312 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 CPNE4Q96A23 557 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-220ENST00000588917 SLC41A3Q96GZ6 507 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 ADGRG7Q96K78 797 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 C7orf34Q96L11 122 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 PRRC1Q96M27 445 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 HS6ST2Q96MM7 605 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 OR5B2Q96R09 309 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 ZNF347Q96SE7 839 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 EPYCQ99645 322 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 TUBA1CQ9BQE3 449 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 FNDC11Q9BVV2 318 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 IL1RAPQ9NPH3 570 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 MCTS1Q9ULC4 181 aaKnown RBP17.59■□□□□ 0.41
CIRBP-220ENST00000588917 ZNF175Q9Y473 711 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 NOTCH2Q04721 2471 aa17.59■□□□□ 0.41
CIRBP-220ENST00000588917 SHANK1Q9Y566 2161 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 TCRBV5S2A0A599 114 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 SULT2B1O00204 365 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 TNFSF11O14788 317 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 DNPH1O43598 174 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 OR2T1O43869 369 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 PMS2P2O95744 297 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 FABP3P05413 133 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 PER3P56645 1201 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 SMIM11AP58511 58 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 PIN1Q13526 163 aaPredicted RBP17.58■□□□□ 0.4
CIRBP-220ENST00000588917 CTU2Q2VPK5 515 aaKnown RBP17.58■□□□□ 0.4
CIRBP-220ENST00000588917 ACSF3Q4G176 576 aaPredicted RBP17.58■□□□□ 0.4
CIRBP-220ENST00000588917 C1QL3Q5VWW1 255 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 TTC33Q6PID6 262 aaPredicted RBP17.58■□□□□ 0.4
CIRBP-220ENST00000588917 LINC00114Q6XXX2 140 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 ADGRE4PQ86SQ3 457 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 WNT2BQ93097 391 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 ZHX1-C8orf76Q96EF9 292 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 RAB3IPQ96QF0 476 aaPredicted RBP17.58■□□□□ 0.4
CIRBP-220ENST00000588917 ZNF300Q96RE9 604 aaPredicted RBP17.58■□□□□ 0.4
CIRBP-220ENST00000588917 TRIB1Q96RU8 372 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 TM9SF2Q99805 663 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 TMEM43Q9BTV4 400 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 PRRG4Q9BZD6 226 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 SLC19A3Q9BZV2 496 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 SH3BGRL2Q9UJC5 107 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 SLC7A7Q9UM01 511 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 SLC5A6Q9Y289 635 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 MEMO1Q9Y316 297 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 PCNX3Q9H6A9 2034 aa17.58■□□□□ 0.4
CIRBP-220ENST00000588917 HTR3EA5X5Y0 456 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 CLCA1A8K7I4 914 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 LRRTM2O43300 516 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 EIF1BO60739 113 aaKnown RBP17.57■□□□□ 0.4
CIRBP-220ENST00000588917 GPIP06744 558 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 FCGR2AP12318 317 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 TIMP3P35625 211 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 RBM34P42696 430 aaKnown RBP17.57■□□□□ 0.4
CIRBP-220ENST00000588917 ZSCAN26Q16670 478 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 OR2A2Q6IF42 318 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 PIWIL3Q7Z3Z3 882 aaKnown RBP17.57■□□□□ 0.4
CIRBP-220ENST00000588917 GDF7Q7Z4P5 450 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 SPATA24Q86W54 205 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 C10orf67Q8IYJ2 551 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 FAM86B1Q8N7N1 296 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 SEPHS2Q99611 448 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 TTYH2Q9BSA4 534 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 TAPBPLQ9BX59 468 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 NDUFAF4Q9P032 175 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 A4GNTQ9UNA3 340 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 V9GYQ6 96 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 HEATR5AQ86XA9 2040 aa17.57■□□□□ 0.4
CIRBP-220ENST00000588917 SLC22A20A6NK97 555 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 H0YC42 278 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 CXCL13O43927 109 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 AHSA1O95433 338 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 IL2RAP01589 272 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 SEMG1P04279 462 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 IDUAP35475 653 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 DIO1P49895 249 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 TPD52P55327 224 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-220ENST00000588917 SLC35A1P78382 337 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 MYBPHQ13203 477 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 TRAM2Q15035 370 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 EEF1A1P5Q5VTE0 462 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 C1orf146Q5VVC0 180 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 C1orf140Q5VVS0 124 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 RPTNQ6XPR3 784 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 P4HA3Q7Z4N8 544 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms