RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 NAA11Q9BSU3 229 aaPredicted RBP12.27□□□□□ -0.45
VMP1-209ENST00000588915 OR51I1Q9H343 314 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 HEATR1Q9H583 2144 aaKnown RBP12.27□□□□□ -0.45
VMP1-209ENST00000588915 SLC17A5Q9NRA2 495 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.27□□□□□ -0.45
VMP1-209ENST00000588915 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.45
VMP1-209ENST00000588915 UPB1Q9UBR1 384 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 SLC9A8Q9Y2E8 581 aa12.27□□□□□ -0.45
VMP1-209ENST00000588915 CENPVL1A0A0U1RR11 272 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 RNF103-CHMP3A0A140T963 221 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 PRSS51A0A1B0GVH4 220 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 WNT11O96014 354 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 OR12D1P0DN82 309 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 IGHV4-31P0DP07 118 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 UQCRC2P22695 453 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 PHC1P78364 1004 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 SLC35A1P78382 337 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 KCNJ10P78508 379 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 SPOCK1Q08629 439 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 ANXA8L1Q5VT79 327 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 OR4F3Q6IEY1 312 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 CCDC103Q8IW40 242 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 CMIPQ8IY22 773 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 ARFGAP2Q8N6H7 521 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 AGR3Q8TD06 166 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 DDIT4LQ96D03 193 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 MECRQ9BV79 373 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 PIF1Q9H611 641 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 OBP2BQ9NPH6 170 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 FLVCR1Q9Y5Y0 555 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 ATP23Q9Y6H3 246 aa12.26□□□□□ -0.45
VMP1-209ENST00000588915 A0A1W2PR80 420 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 VWC2LB2RUY7 222 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 FAAHO00519 579 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 SCN2BO60939 215 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 NUDT17P0C025 328 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 MPGP29372 298 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 FOXG1P55316 489 aaPredicted RBP12.25□□□□□ -0.45
VMP1-209ENST00000588915 OR2B6P58173 313 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 PRPS1P60891 318 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 TXNL4AP83876 142 aaKnown RBP12.25□□□□□ -0.45
VMP1-209ENST00000588915 SLC17A1Q14916 467 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 SWI5Q1ZZU3 235 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 EMBQ6PCB8 327 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 PAQR6Q6TCH4 344 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 FRRS1Q6ZNA5 592 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 ZCCHC23Q6ZST2 131 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 GSPT2Q8IYD1 628 aaKnown RBP12.25□□□□□ -0.45
VMP1-209ENST00000588915 CLECL1Q8IZS7 167 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 OR52E4Q8NGH9 312 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 TMEM45BQ96B21 275 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 ROPN1LQ96C74 230 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 SF3B5Q9BWJ5 86 aaKnown RBP12.25□□□□□ -0.45
VMP1-209ENST00000588915 OR11A1Q9GZK7 315 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 MANSC1Q9H8J5 431 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 MYOZ1Q9NP98 299 aaPredicted RBP12.25□□□□□ -0.45
VMP1-209ENST00000588915 FBXO9Q9UK97 447 aaPredicted RBP12.25□□□□□ -0.45
VMP1-209ENST00000588915 FKBP7Q9Y680 259 aa12.25□□□□□ -0.45
VMP1-209ENST00000588915 TLDC2A0PJX2 215 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 SKAP2O75563 359 aaPredicted RBP12.24□□□□□ -0.45
VMP1-209ENST00000588915 ARRB2P32121 409 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 RYKP34925 604 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 IDH2P48735 452 aaKnown RBP12.24□□□□□ -0.45
VMP1-209ENST00000588915 PDLIM4P50479 330 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 POLR2HP52434 150 aaKnown RBP12.24□□□□□ -0.45
VMP1-209ENST00000588915 DPY19L1Q2PZI1 675 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 KRTAP24-1Q3LI83 254 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 TSPO2Q5TGU0 170 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 SAXO2Q658L1 398 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 FAM166AQ6J272 317 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 CASP12Q6UXS9 341 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 OLIG3Q7RTU3 272 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 ABHD12BQ7Z5M8 362 aaPredicted RBP12.24□□□□□ -0.45
VMP1-209ENST00000588915 LRRC34Q8IZ02 419 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 POMGNT2Q8NAT1 580 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 ZNF540Q8NDQ6 660 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 OR4A15Q8NGL6 344 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 TCP10LQ8TDR4 215 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 TESCQ96BS2 214 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 ZG16BQ96DA0 208 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 NEURL3Q96EH8 262 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 C1QTNF6Q9BXI9 259 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 SLC7A10Q9NS82 523 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 SLC17A7Q9P2U7 560 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 KCNS2Q9ULS6 477 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 NBEAL1Q6ZS30 2694 aa12.24□□□□□ -0.45
VMP1-209ENST00000588915 TMED7-TICAM2A0A0A6YYA0 188 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 BCAS1O75363 584 aaPredicted RBP12.23□□□□□ -0.45
VMP1-209ENST00000588915 BPGMP07738 259 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 IMPDH2P12268 514 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 UQCRBP14927 111 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 ZNF16P17020 682 aaPredicted RBP12.23□□□□□ -0.45
VMP1-209ENST00000588915 SRD5A1P18405 259 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 SLC1A3P43003 542 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 KHKP50053 298 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 HPCAP84074 193 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 FUT5Q11128 374 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 CASP8Q14790 479 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 GSTA3Q16772 222 aa12.23□□□□□ -0.45
VMP1-209ENST00000588915 MST1LQ2TV78 715 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms