RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 GNRHR2Q96P88 292 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 EGLN3Q9H6Z9 239 aa20.18■□□□□ 0.82
ATG4D-209ENST00000588857 ZNF552Q9H707 407 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-209ENST00000588857 A0A0G2JMM0 328 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 A0A1W2PPB8 328 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 A0A1W2PRS3 328 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 ZAR1LA6NP61 321 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 KIR3DP1A8MWS1 328 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 E9PQ18 207 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 ETV2O00321 342 aaPredicted RBP20.17■□□□□ 0.82
ATG4D-209ENST00000588857 GGT2P36268 569 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 EIF1P41567 113 aaKnown RBP20.17■□□□□ 0.82
ATG4D-209ENST00000588857 DSCR4P56555 118 aaPredicted RBP20.17■□□□□ 0.82
ATG4D-209ENST00000588857 FOXF1Q12946 379 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 SLC25A53Q5H9E4 307 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 OAFQ86UD1 273 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 KIF18BQ86Y91 864 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 C10orf53Q8N6V4 93 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 RNF32Q9H0A6 362 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 PRORYQ9H606 182 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 PNPLA3Q9NST1 481 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 PCDHGB5Q9Y5G0 923 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 KCNMB2Q9Y691 235 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 CDH10Q9Y6N8 788 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 HSPE1-MOB4S4R3N1 261 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 CHD6Q8TD26 2715 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 A8MVM7 634 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 CH25HO95992 272 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 FUT1P19526 365 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 DPP4P27487 766 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 GPR85P60893 370 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 ARG2P78540 354 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 IL5RAQ01344 420 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 EGR4Q05215 589 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 UGT2A3Q6UWM9 527 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 CCDC81Q6ZN84 652 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 ZNF620Q6ZNG0 422 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 CLDN22Q8N7P3 220 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 FDCSPQ8NFU4 85 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 OR13C2Q8NGS9 318 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 FANK1Q8TC84 345 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 ZBTB8AQ96BR9 441 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 FAM173AQ9BQD7 235 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 CHRNA9Q9UGM1 479 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 DKKL1Q9UK85 242 aa20.17■□□□□ 0.82
ATG4D-209ENST00000588857 TMEM72A0PK05 275 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 HCN1O60741 890 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 RCBTB2O95199 551 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 WISP1O95388 367 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 MAP2K6P52564 334 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 CHN2P52757 468 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 UCNP55089 124 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 NUP107P57740 925 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 CDC42P60953 191 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 TMEM236Q5W0B7 351 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 RPL13AP3Q6NVV1 102 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 C5orf46Q6UWT4 87 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 DEPDC4Q8N2C3 294 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 FAM81AQ8TBF8 368 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 HAS2Q92819 552 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 KTI12Q96EK9 354 aaPredicted RBP20.16■□□□□ 0.82
ATG4D-209ENST00000588857 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.16■□□□□ 0.82
ATG4D-209ENST00000588857 SERINC1Q9NRX5 453 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 DEPPQ9NTK1 212 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 TBC1D23Q9NUY8 699 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 IMPAD1Q9NX62 359 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 IL20Q9NYY1 176 aa20.16■□□□□ 0.82
ATG4D-209ENST00000588857 RALYQ9UKM9 306 aaKnown RBP20.16■□□□□ 0.82
ATG4D-209ENST00000588857 BOKQ9UMX3 212 aaPredicted RBP20.16■□□□□ 0.82
ATG4D-209ENST00000588857 FREM3P0C091 2139 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 TRAV36DV7A0A075B6V5 113 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 OR7A10O76100 309 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 CD46P15529 392 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 HK1P19367 917 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 TCEA1P23193 301 aaKnown RBP20.15■□□□□ 0.82
ATG4D-209ENST00000588857 GIPRP48546 466 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 SLC9A3P48764 834 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 ISL1P61371 349 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 GINS1Q14691 196 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 OR52L1Q8NGH7 329 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 OR51A7Q8NH64 312 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 STK35Q8TDR2 534 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 DTNBP1Q96EV8 351 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 C5orf34Q96MH7 638 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 NPAS1Q99742 590 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 PLA2G12AQ9BZM1 189 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 TUBA8Q9NY65 449 aaPredicted RBP20.15■□□□□ 0.82
ATG4D-209ENST00000588857 ZNF337Q9Y3M9 751 aa20.15■□□□□ 0.82
ATG4D-209ENST00000588857 SHISA8B8ZZ34 492 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 ZNF208O43345 1280 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 SP1P08047 785 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 BMP7P18075 431 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 ADH6P28332 368 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 RPS5P46782 204 aaKnown RBP20.14■□□□□ 0.81
ATG4D-209ENST00000588857 SMSP52788 366 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 TMPRSS3P57727 454 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 TOMM20Q15388 145 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 ZNF74Q16587 644 aa20.14■□□□□ 0.81
ATG4D-209ENST00000588857 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.14■□□□□ 0.81
ATG4D-209ENST00000588857 ZBED5Q49AG3 693 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms