RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 TACR3P29371 465 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 ACAA2P42765 397 aaKnown RBP17■□□□□ 0.31
CCDC130-209ENST00000588809 STX1BP61266 288 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 ZSWIM7Q19AV6 140 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 FUNDC1Q8IVP5 155 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 OR52P1PQ8NH57 321 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 DDIT4LQ96D03 193 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 TMEM19Q96HH6 336 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 EBF4Q9BQW3 602 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 CCDC28BQ9BUN5 200 aa17■□□□□ 0.31
CCDC130-209ENST00000588809 A0A096LPI6 279 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 A0A0G2JPF8 293 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 TMEM72A0PK05 275 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 HNRNPCL2B2RXH8 293 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 HNRNPCL3B7ZW38 293 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 GPR171O14626 319 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 HNRNPCL1O60812 293 aaKnown RBP16.99■□□□□ 0.31
CCDC130-209ENST00000588809 PLAUP00749 431 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 HNRNPCL4P0DMR1 293 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 IRX1P78414 480 aaPredicted RBP16.99■□□□□ 0.31
CCDC130-209ENST00000588809 FADDQ13158 208 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 RGNQ15493 299 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 LRIF1Q5T3J3 769 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 PRAMEF8Q5VWM4 474 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 PRAMEF7Q5VXH5 474 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 ADAM5Q6NVV9 412 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 SLC2A7Q6PXP3 512 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 BLOC1S3Q6QNY0 202 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 BHLHA15Q7RTS1 189 aaPredicted RBP16.99■□□□□ 0.31
CCDC130-209ENST00000588809 VRK2Q86Y07 508 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 ZNF775Q96BV0 537 aaPredicted RBP16.99■□□□□ 0.31
CCDC130-209ENST00000588809 RAD21L1Q9H4I0 556 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 A4GALTQ9NPC4 353 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 NGBQ9NPG2 151 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 TMEM45AQ9NWC5 275 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 ZNF443Q9Y2A4 671 aaPredicted RBP16.99■□□□□ 0.31
CCDC130-209ENST00000588809 CHST2Q9Y4C5 530 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 GMEB1Q9Y692 573 aa16.99■□□□□ 0.31
CCDC130-209ENST00000588809 CLIC1O00299 241 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 HS3ST1O14792 307 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 ARHGEF9O43307 516 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 EIF1BO60739 113 aaKnown RBP16.98■□□□□ 0.31
CCDC130-209ENST00000588809 TMCC2O75069 709 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 IMPDH2P12268 514 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 PAX1P15863 534 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 SLC35A1P78382 337 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 LARS2Q15031 903 aaKnown RBP16.98■□□□□ 0.31
CCDC130-209ENST00000588809 NCMAPQ5T1S8 102 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 PRSS57Q6UWY2 283 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 SSX8Q7RTT4 187 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 ZNF100Q8IYN0 542 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 ZNF611Q8N823 705 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 STON2Q8WXE9 905 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 VIPAS39Q9H9C1 493 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 BCL2L10Q9HD36 194 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 SLC52A3Q9NQ40 469 aa16.98■□□□□ 0.31
CCDC130-209ENST00000588809 ZC3H12DA2A288 527 aaKnown RBP16.97■□□□□ 0.31
CCDC130-209ENST00000588809 TMEM247A6NEH6 219 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 HMGB1P1B2RPK0 211 aaPredicted RBP16.97■□□□□ 0.31
CCDC130-209ENST00000588809 RAMP1O60894 148 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 LYZL6O75951 148 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 PGM3O95394 542 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 CCNA2P20248 432 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 IGHV1-2P23083 117 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 NTF4P34130 210 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 AQP5P55064 265 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 OR2B6P58173 313 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 RPS26P11Q5JNZ5 115 aaPredicted RBP16.97■□□□□ 0.31
CCDC130-209ENST00000588809 Q5PR19 223 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 FBXW9Q5XUX1 488 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 PAQR6Q6TCH4 344 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.97■□□□□ 0.31
CCDC130-209ENST00000588809 P2RY8Q86VZ1 359 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 CCDC103Q8IW40 242 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 CLIP4Q8N3C7 705 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 GOLGA6L1Q8N7Z2 621 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 SLC35B4Q969S0 331 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 DNAJA3Q96EY1 480 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 SPATA9Q9BWV2 254 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 GSX2Q9BZM3 304 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 ESRP2Q9H6T0 727 aaKnown RBP16.97■□□□□ 0.31
CCDC130-209ENST00000588809 SLC25A37Q9NYZ2 338 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 CCDC167Q9P0B6 97 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 MALT1Q9UDY8 824 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 ZNF232Q9UNY5 417 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 NOSIPQ9Y314 301 aaKnown RBP16.97■□□□□ 0.31
CCDC130-209ENST00000588809 IFT52Q9Y366 437 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 RNF115Q9Y4L5 304 aa16.97■□□□□ 0.31
CCDC130-209ENST00000588809 TRBV5-3A0A0A0MS03 114 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 NUDT7P0C024 238 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 GKN3PP0CG01 181 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 ATP4BP51164 291 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 TIMM23BQ5SRD1 257 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 WBP2NLQ6ICG8 309 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 HDXQ7Z353 690 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 P3H2Q8IVL5 708 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 MSRB3Q8IXL7 192 aa16.96■□□□□ 0.31
CCDC130-209ENST00000588809 ZNF433Q8N7K0 673 aaPredicted RBP16.96■□□□□ 0.31
CCDC130-209ENST00000588809 LILRB1Q8NHL6 650 aaPredicted RBP16.96■□□□□ 0.31
CCDC130-209ENST00000588809 DYDC1Q8WWB3 177 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms