RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 C16orf62Q7Z3J2 963 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 OR8J2Q8NGG1 315 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 TUBGCP3Q96CW5 907 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 ZHX1-C8orf76Q96EF9 292 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 C1QTNF6Q9BXI9 259 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 SLC17A5Q9NRA2 495 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 POLE3Q9NRF9 147 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 SLC7A10Q9NS82 523 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 WDR45Q9Y484 360 aa16.12■□□□□ 0.17
CCDC43-204ENST00000588687 ATP6V1G2-DDX39BF2Z307 99 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 OR12D1P0DN82 309 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 IMPDH2P12268 514 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 USF1P22415 310 aaPredicted RBP16.11■□□□□ 0.17
CCDC43-204ENST00000588687 CLK1P49759 484 aaKnown RBP16.11■□□□□ 0.17
CCDC43-204ENST00000588687 PHC1P78364 1004 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 EMX2Q04743 252 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 SLC17A1Q14916 467 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 PGS1Q32NB8 556 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 TSPO2Q5TGU0 170 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 SAXO2Q658L1 398 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 CYB5R2Q6BCY4 276 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 CASP12Q6UXS9 341 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 HMGN2P46Q86SG4 172 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 RAB8BQ92930 207 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 BEX2Q9BXY8 128 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 EXD2Q9NVH0 621 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 TRAPPC4Q9Y296 219 aa16.11■□□□□ 0.17
CCDC43-204ENST00000588687 TENM1Q9UKZ4 2725 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 SLC35F4A4IF30 521 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 AP3D1O14617 1153 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 RYKP34925 604 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 C9orf135Q5VTT2 229 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 TNFAIP8L2Q6P589 184 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-204ENST00000588687 ZNF563Q8TA94 476 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 TCP10LQ8TDR4 215 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 ROPN1LQ96C74 230 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 BOD1Q96IK1 185 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 SORCS2Q96PQ0 1159 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 PRR14Q9BWN1 585 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 NOP53Q9NZM5 478 aaKnown RBP16.1■□□□□ 0.17
CCDC43-204ENST00000588687 TMEM181Q9P2C4 612 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 SLC9A8Q9Y2E8 581 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 AMDHD2Q9Y303 409 aa16.1■□□□□ 0.17
CCDC43-204ENST00000588687 ZC3H12DA2A288 527 aaKnown RBP16.09■□□□□ 0.17
CCDC43-204ENST00000588687 LMX1BO60663 402 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 FKBP2P26885 142 aaKnown RBP16.09■□□□□ 0.17
CCDC43-204ENST00000588687 APOBEC3AP31941 199 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-204ENST00000588687 MAGEA8P43361 318 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 LSM11P83369 360 aaKnown RBP eCLIP16.09■□□□□ 0.177e-6■■■■□ 19.8
CCDC43-204ENST00000588687 SRSF2Q01130 221 aaKnown RBP16.09■□□□□ 0.17
CCDC43-204ENST00000588687 SMU1Q2TAY7 513 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 ANKRD46Q86W74 232 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 ZIC4Q8N9L1 334 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 OR4A15Q8NGL6 344 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 KIF18AQ8NI77 898 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 CNOT9Q92600 299 aaKnown RBP16.09■□□□□ 0.17
CCDC43-204ENST00000588687 TMEM45BQ96B21 275 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 NEURL3Q96EH8 262 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 C19orf24Q9BVV8 132 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 SHARPINQ9H0F6 387 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 LGALS13Q9UHV8 139 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 OSGIN1Q9UJX0 560 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 ATP23Q9Y6H3 246 aa16.09■□□□□ 0.17
CCDC43-204ENST00000588687 TMEM72A0PK05 275 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 ZNF208O43345 1280 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 SPAG7O75391 227 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 AGR2O95994 175 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 CREB1P16220 341 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 ETV4P43268 484 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 OR2B6P58173 313 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 KCNJ10P78508 379 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 MAD2L1Q13257 205 aaPredicted RBP16.08■□□□□ 0.16
CCDC43-204ENST00000588687 C1QTNF12Q5T7M4 302 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 IL17RELQ6ZVW7 336 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 DEPDC4Q8N2C3 294 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 RIBC1Q8N443 379 aaPredicted RBP16.08■□□□□ 0.16
CCDC43-204ENST00000588687 ARFGAP2Q8N6H7 521 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 XAGE5Q8WWM1 108 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 MSI2Q96DH6 328 aaKnown RBP16.08■□□□□ 0.16
CCDC43-204ENST00000588687 ZIM3Q96PE6 472 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 FKRPQ9H9S5 495 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 PCDHGB4Q9UN71 923 aa16.08■□□□□ 0.16
CCDC43-204ENST00000588687 TMED7-TICAM2A0A0A6YYA0 188 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 IGHV4-61A0A0C4DH41 118 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 HMGN4O00479 90 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 FAAHO00519 579 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 EIF1BO60739 113 aaKnown RBP16.07■□□□□ 0.16
CCDC43-204ENST00000588687 BPGMP07738 259 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 NUDT17P0C025 328 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 CCNA2P20248 432 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 RPS4Y1P22090 263 aaKnown RBP16.07■□□□□ 0.16
CCDC43-204ENST00000588687 UQCRC2P22695 453 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 MPGP29372 298 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 NR4A2P43354 598 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 IDH2P48735 452 aaKnown RBP16.07■□□□□ 0.16
CCDC43-204ENST00000588687 GZMKP49863 264 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 KHKP50053 298 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 CHRNB3Q05901 458 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 CASP8Q14790 479 aa16.07■□□□□ 0.16
CCDC43-204ENST00000588687 ATAD3BQ5T9A4 648 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms