RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TMEM181Q9P2C4 612 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 TMED7Q9Y3B3 224 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 PRSS51A0A1B0GVH4 220 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 TYROBPO43914 113 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 DNAJA2O60884 412 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 SERPINE1P05121 402 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 MYZAPP0CAP1 466 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 ZNF16P17020 682 aaPredicted RBP12.04□□□□□ -0.48
HDAC5-208ENST00000588419 S100A3P33764 101 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 NTF4P34130 210 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 ETV4P43268 484 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 PHC1P78364 1004 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 PDK3Q15120 406 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 GABRA6Q16445 453 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 SYPL1Q16563 259 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 C6orf52Q5T4I8 152 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 C11orf71Q6IPW1 123 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 KLHL24Q6TFL4 600 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 DNM1P46Q6ZS02 220 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 ADGRG3Q86Y34 549 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 HIPK1Q86Z02 1210 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 PHC2Q8IXK0 858 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 ANKFN1Q8N957 763 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 WDR60Q8WVS4 1066 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 FAM168AQ92567 244 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 NEURL3Q96EH8 262 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 NAA11Q9BSU3 229 aaPredicted RBP12.04□□□□□ -0.48
HDAC5-208ENST00000588419 ROPN1BQ9BZX4 212 aaPredicted RBP12.04□□□□□ -0.48
HDAC5-208ENST00000588419 CENPHQ9H3R5 247 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 ROPN1Q9HAT0 212 aaPredicted RBP12.04□□□□□ -0.48
HDAC5-208ENST00000588419 MALT1Q9UDY8 824 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 SLC9A8Q9Y2E8 581 aa12.04□□□□□ -0.48
HDAC5-208ENST00000588419 PRAMEF27A3QJZ7 478 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 E9PBE3 544 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 ATP6V1G2-DDX39BF2Z307 99 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 HMGN4O00479 90 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 SCN2BO60939 215 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 LY6HO94772 140 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 GSNP06396 782 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 THBS1P07996 1170 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 CHRM4P08173 479 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 IMPDH2P12268 514 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 LBPP18428 481 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 BGNP21810 368 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 TACR3P29371 465 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 SLC1A6P48664 564 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 POLR2HP52434 150 aaKnown RBP12.03□□□□□ -0.48
HDAC5-208ENST00000588419 CLNS1AP54105 237 aaKnown RBP12.03□□□□□ -0.48
HDAC5-208ENST00000588419 SLC35A1P78382 337 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 SLC25A3Q00325 362 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 PLAURQ03405 335 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 CARTPTQ16568 116 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 SMU1Q2TAY7 513 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 TMEM249Q2WGJ8 235 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 OTUD3Q5T2D3 398 aaPredicted RBP12.03□□□□□ -0.48
HDAC5-208ENST00000588419 OR7E24Q6IFN5 339 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 GPAT4Q86UL3 456 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 PANX1Q96RD7 426 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 PAIP2Q9BPZ3 127 aaKnown RBP12.03□□□□□ -0.48
HDAC5-208ENST00000588419 INPP5KQ9BT40 448 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 GRIP2Q9C0E4 1043 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 C20orf27Q9GZN8 174 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 FKRPQ9H9S5 495 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 EXOSC3Q9NQT5 275 aaKnown RBP12.03□□□□□ -0.48
HDAC5-208ENST00000588419 SLC7A10Q9NS82 523 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 OSGIN1Q9UJX0 560 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 RAP2CQ9Y3L5 183 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 FLVCR1Q9Y5Y0 555 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 MALRD1Q5VYJ5 2156 aa12.03□□□□□ -0.48
HDAC5-208ENST00000588419 ZC3H12DA2A288 527 aaKnown RBP12.02□□□□□ -0.49
HDAC5-208ENST00000588419 RGS16O15492 202 aaPredicted RBP12.02□□□□□ -0.49
HDAC5-208ENST00000588419 DNPH1O43598 174 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 KRT33AO76009 404 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 NR2F1P10589 423 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 UQCRBP14927 111 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 IL7RP16871 459 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 CDKN2CP42773 168 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 HTR3AP46098 478 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 RPL14P50914 215 aaKnown RBP12.02□□□□□ -0.49
HDAC5-208ENST00000588419 SLC16A1P53985 500 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 CASP8Q14790 479 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 OR7A5Q15622 319 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 DPY19L1Q2PZI1 675 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 MRPL2Q5T653 305 aaKnown RBP12.02□□□□□ -0.49
HDAC5-208ENST00000588419 TSPO2Q5TGU0 170 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 ZNF621Q6ZSS3 439 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 CADM2Q8N3J6 435 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 TRIML2Q8N7C3 387 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 TESCQ96BS2 214 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 C3orf49Q96BT1 292 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 FBXO17Q96EF6 278 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 ZIM3Q96PE6 472 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 TNFRSF13CQ96RJ3 184 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 SAP130Q9H0E3 1048 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 SLC17A5Q9NRA2 495 aa12.02□□□□□ -0.49
HDAC5-208ENST00000588419 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.02□□□□□ -0.49
HDAC5-208ENST00000588419 V9GYY5 206 aaPredicted RBP12.02□□□□□ -0.49
HDAC5-208ENST00000588419 GOLGA8QA0A0J9YX86 632 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms