RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 HDAC3O15379 428 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 SNNO75324 88 aaPredicted RBP12.64□□□□□ -0.39
VMP1-206ENST00000587945 CD8AP01732 235 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 IMPDH2P12268 514 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 TACR3P29371 465 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 POLR2HP52434 150 aaKnown RBP12.64□□□□□ -0.39
VMP1-206ENST00000587945 MAPK11Q15759 364 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 MRPL2Q5T653 305 aaKnown RBP12.64□□□□□ -0.39
VMP1-206ENST00000587945 OR52E4Q8NGH9 312 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 PIGXQ8TBF5 258 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 WDR60Q8WVS4 1066 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 TRMT61AQ96FX7 289 aaKnown RBP12.64□□□□□ -0.39
VMP1-206ENST00000587945 MTHFD2LQ9H903 347 aaPredicted RBP12.64□□□□□ -0.39
VMP1-206ENST00000587945 THAP1Q9NVV9 213 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 RLIMQ9NVW2 624 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 CISD1Q9NZ45 108 aaKnown RBP12.64□□□□□ -0.39
VMP1-206ENST00000587945 TMEM181Q9P2C4 612 aa12.64□□□□□ -0.39
VMP1-206ENST00000587945 FREM1Q5H8C1 2179 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 HEATR5AQ86XA9 2040 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 CFAP73A6NFT4 308 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 KIAA1324LA8MWY0 1029 aaPredicted RBP12.63□□□□□ -0.39
VMP1-206ENST00000587945 RFXANKO14593 260 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 ZNF500O60304 480 aaPredicted RBP12.63□□□□□ -0.39
VMP1-206ENST00000587945 MRPL33O75394 65 aaKnown RBP12.63□□□□□ -0.39
VMP1-206ENST00000587945 IGHV4-39P01824 125 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 GKN3PP0CG01 181 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 ETFAP13804 333 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 IL7RP16871 459 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 RPS4Y1P22090 263 aaKnown RBP12.63□□□□□ -0.39
VMP1-206ENST00000587945 ACVR1BP36896 505 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 HTR3AP46098 478 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 CLK1P49759 484 aaKnown RBP12.63□□□□□ -0.39
VMP1-206ENST00000587945 ZNF83P51522 516 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 SLC16A1P53985 500 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 CDH11P55287 796 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 H3F3AP84243 136 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 KRTAP1-1Q07627 177 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 SPOCK1Q08629 439 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 EPS8Q12929 822 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 GTDC1Q4AE62 458 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 SLC9B1Q4ZJI4 515 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 C9orf135Q5VTT2 229 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 MAVSQ7Z434 540 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 P2RY8Q86VZ1 359 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 VRK2Q86Y07 508 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 CMIPQ8IY22 773 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 TRAF4Q9BUZ4 470 aaPredicted RBP12.63□□□□□ -0.39
VMP1-206ENST00000587945 ASB6Q9NWX5 421 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 GDF2Q9UK05 429 aaPredicted RBP12.63□□□□□ -0.39
VMP1-206ENST00000587945 TRAPPC4Q9Y296 219 aa12.63□□□□□ -0.39
VMP1-206ENST00000587945 TLN2Q9Y4G6 2542 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 TRPC5OSA6NMA1 111 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 GPR171O14626 319 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 DNPH1O43598 174 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 KRT75O95678 551 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 DBIP07108 87 aaKnown RBP12.62□□□□□ -0.39
VMP1-206ENST00000587945 ITGA5P08648 1049 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 FKBP2P26885 142 aaKnown RBP12.62□□□□□ -0.39
VMP1-206ENST00000587945 IDUAP35475 653 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 SLC1A3P43003 542 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 MAGEA8P43361 318 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 ANXA11P50995 505 aaKnown RBP12.62□□□□□ -0.39
VMP1-206ENST00000587945 MVDP53602 400 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 PPP2R2BQ00005 443 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 GNA13Q14344 377 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 CASP12Q6UXS9 341 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 CROCCP2Q86T23 111 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 DDIT4LQ96D03 193 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
VMP1-206ENST00000587945 C1QTNF6Q9BXI9 259 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 REG4Q9BYZ8 158 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 SLCO5A1Q9H2Y9 848 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 ALG2Q9H553 416 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 SLC25A15Q9Y619 301 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 JMJD1CQ15652 2540 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 HIVEP2P31629 2446 aa12.62□□□□□ -0.39
VMP1-206ENST00000587945 ZANQ9Y493 2812 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 E7EQL1 145 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 ZNF208O43345 1280 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 SLC22A3O75751 556 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 THBS1P07996 1170 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 IDO1P14902 403 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 CRATP43155 626 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
VMP1-206ENST00000587945 SLC35A1P78382 337 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 TXNL4AP83876 142 aaKnown RBP12.61□□□□□ -0.39
VMP1-206ENST00000587945 LRRC74AQ0VAA2 488 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 SLC17A1Q14916 467 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 GABRA6Q16445 453 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 PDCD4Q53EL6 469 aaKnown RBP12.61□□□□□ -0.39
VMP1-206ENST00000587945 RPS26P11Q5JNZ5 115 aaPredicted RBP12.61□□□□□ -0.39
VMP1-206ENST00000587945 ZNF836Q6ZNA1 936 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 PEX5LQ8IYB4 626 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 GLB1L3Q8NCI6 653 aaPredicted RBP12.61□□□□□ -0.39
VMP1-206ENST00000587945 OR9I1Q8NGQ6 314 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 OR52P1PQ8NH57 321 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 PMM1Q92871 262 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 MUS81Q96NY9 551 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 OR52B2Q96RD2 323 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms