RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 FAM71CQ8NEG0 241 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 FLVCR1-AS1Q8TAF5 88 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 CTHRC1Q96CG8 243 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 NECTIN4Q96NY8 510 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 ERMAPQ96PL5 475 aaPredicted RBP17.12■□□□□ 0.33
DDX39A-206ENST00000587730 TNFRSF13CQ96RJ3 184 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 SCML1Q9UN30 329 aa17.12■□□□□ 0.33
DDX39A-206ENST00000587730 PCDHGA9Q9Y5G4 932 aaKnown RBP17.12■□□□□ 0.33
DDX39A-206ENST00000587730 MDC1Q14676 2089 aaKnown RBP17.11■□□□□ 0.33
DDX39A-206ENST00000587730 TRBV2A0A0J9YWF9 115 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 FAM221BA6H8Z2 402 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 RAB40ALP0C0E4 278 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 SNRPBP14678 240 aaKnown RBP17.11■□□□□ 0.33
DDX39A-206ENST00000587730 ALG10BQ5I7T1 473 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 LINC00114Q6XXX2 140 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 DPY19L2P2Q6ZN68 376 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 KCTD20Q7Z5Y7 419 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 RAB40AQ8WXH6 277 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 GSDMCQ9BYG8 508 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 SPRTNQ9H040 489 aaPredicted RBP17.11■□□□□ 0.33
DDX39A-206ENST00000587730 ZDHHC4Q9NPG8 344 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 NANSQ9NR45 359 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 ACTR10Q9NZ32 417 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 GLTPQ9NZD2 209 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 RPS6KB2Q9UBS0 482 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 UBQLN2Q9UHD9 624 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 TRIOBPQ9H2D6 2365 aa17.11■□□□□ 0.33
DDX39A-206ENST00000587730 A0A1B0GUH1 482 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 AIPO00170 330 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 AGRPO00253 132 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 ARPC3O15145 178 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 P2RX6O15547 441 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 LDOC1O95751 146 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 SLC35E2P0CK97 266 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 POU3F3P20264 500 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 MAT2AP31153 395 aaKnown RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 GDNFP39905 211 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 MNDAP41218 407 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 CAMK2DQ13557 499 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 NFATC4Q14934 902 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 SLC6A19Q695T7 634 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 GPR139Q6DWJ6 353 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 RPTNQ6XPR3 784 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 TIGD4Q8IY51 512 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 OR6V1Q8N148 313 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 CYB561A3Q8NBI2 242 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 OR52E2Q8NGJ4 325 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 RPS4Y2Q8TD47 263 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 GRHL3Q8TE85 626 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 PEX11GQ96HA9 241 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 LMF2Q9BU23 707 aaKnown RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 C20orf85Q9H1P6 137 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 DLL4Q9NR61 685 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 CXXC1Q9P0U4 656 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 KLHL9Q9P2J3 617 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 MRPS7Q9Y2R9 242 aaKnown RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 ARPC4-TTLL3A0A0A6YYG9 625 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 ZNF593O00488 134 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 CYR61O00622 381 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 FGF17O60258 216 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 CTSVO60911 334 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 APBB3O95704 486 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 EDNRAP25101 427 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 WASP42768 502 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 ADPRHP54922 357 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 SCAND1P57086 179 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 MGAT2Q10469 447 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 TP53I3Q53FA7 332 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 FIGNL1Q6PIW4 674 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 OR8H3Q8N146 312 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 C12orf76Q8N812 135 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 DACT3Q96B18 629 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 SGTBQ96EQ0 304 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 RBM18Q96H35 190 aaKnown RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 LCORQ96JN0 433 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 WDR92Q96MX6 357 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 SLC19A3Q9BZV2 496 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 ZNF436Q9C0F3 470 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 LMAN2LQ9H0V9 348 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 HEXA-AS1Q9H8Q6 139 aa17.1■□□□□ 0.33
DDX39A-206ENST00000587730 TMA7Q9Y2S6 64 aaKnown RBP17.1■□□□□ 0.33
DDX39A-206ENST00000587730 LOC105369274A0A096LPK9 316 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 A0A1B0GVC2 190 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 A6NIN4 97 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 EFCAB7A8K855 629 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 TNFRSF10CO14798 259 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 CALCBP10092 127 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 CLUP10909 449 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 PSMB1P20618 241 aaKnown RBP17.09■□□□□ 0.33
DDX39A-206ENST00000587730 PTNP21246 168 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 MAPK3P27361 379 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-206ENST00000587730 LCN1P31025 176 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 SRP54P61011 504 aaKnown RBP17.09■□□□□ 0.33
DDX39A-206ENST00000587730 TCEA2Q15560 299 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 ST3GAL2Q16842 350 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 FCRL6Q6DN72 434 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 TANGO2Q6ICL3 276 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 RFPL4BQ6ZWI9 263 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 SLC35F3Q8IY50 421 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms