RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 C9orf43Q8TAL5 461 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-204ENST00000587339 TMEM80Q96HE8 168 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 TSC22D3Q99576 134 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 NANSQ9NR45 359 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 CMC2Q9NRP2 79 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 SDHAF3Q9NRP4 125 aa18.06■□□□□ 0.48
TRIM47-204ENST00000587339 ANKUB1A6NFN9 424 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 C21orf140B9A014 251 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 NOL3O60936 208 aaKnown RBP18.05■□□□□ 0.48
TRIM47-204ENST00000587339 TRMUO75648 421 aaKnown RBP18.05■□□□□ 0.48
TRIM47-204ENST00000587339 PPP1R3DO95685 299 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 FTH1P19P0C7X4 201 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 ACVR2AP27037 513 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 POLR2HP52434 150 aaKnown RBP18.05■□□□□ 0.48
TRIM47-204ENST00000587339 TMBIM6P55061 237 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 CDH11P55287 796 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 SUMO3P55854 103 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-204ENST00000587339 DNASE1L3Q13609 305 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 IRF3Q14653 427 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 OPN5Q6U736 354 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 CACTIN-AS1Q8N1I8 211 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 TMEM234Q8WY98 164 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 C12orf43Q96C57 262 aaKnown RBP18.05■□□□□ 0.48
TRIM47-204ENST00000587339 KTI12Q96EK9 354 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-204ENST00000587339 GPR87Q9BY21 358 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 NAA50Q9GZZ1 169 aaKnown RBP18.05■□□□□ 0.48
TRIM47-204ENST00000587339 FN3KQ9H479 309 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 TAS2R16Q9NYV7 291 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 H2AFY2Q9P0M6 372 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-204ENST00000587339 SDK2Q58EX2 2172 aa18.05■□□□□ 0.48
TRIM47-204ENST00000587339 SPAARA0A1B0GVQ0 90 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 TP53I11O14683 189 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 SLC25A12O75746 678 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 ADRA2AP08913 450 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 ADORA3P0DMS8 318 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 PEPDP12955 493 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 DLSTP36957 453 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 MTNR1AP48039 350 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 KLHL22Q53GT1 634 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 FCRLBQ6BAA4 426 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 CXXC5Q7LFL8 322 aaKnown RBP18.04■□□□□ 0.48
TRIM47-204ENST00000587339 CPOQ8IVL8 374 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 LIPHQ8WWY8 451 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 OTULINQ96BN8 352 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 DOK1Q99704 481 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 FUNDC2Q9BWH2 189 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 CDCP1Q9H5V8 836 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 HINT3Q9NQE9 182 aaKnown RBP18.04■□□□□ 0.48
TRIM47-204ENST00000587339 PTTG2Q9NZH5 202 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 MED11Q9P086 117 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 PPP4R1LQ9P1A2 415 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 WIF1Q9Y5W5 379 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 FAM183AA6NL82 134 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 PTHP01270 115 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 RPL4P36578 427 aaKnown RBP18.04■□□□□ 0.48
TRIM47-204ENST00000587339 CASP3P42574 277 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 HTR3AP46098 478 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 PRPS1P60891 318 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 RPS4XP62701 263 aaKnown RBP18.04■□□□□ 0.48
TRIM47-204ENST00000587339 IL20RBQ6UXL0 311 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 RPS19BP1Q86WX3 136 aaKnown RBP18.04■□□□□ 0.48
TRIM47-204ENST00000587339 RNFT2Q96EX2 444 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 CRELD1Q96HD1 420 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 MOGAT1Q96PD6 335 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 IRF2BPLQ9H1B7 796 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 FBXL4Q9UKA2 621 aa18.04■□□□□ 0.48
TRIM47-204ENST00000587339 TMED7-TICAM2A0A0A6YYA0 188 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 RIIAD1A6NNX1 92 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 B4DXG7 233 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 H3BMQ9 156 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 MASP2O00187 686 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 HPP00738 406 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 F8A1P23610 371 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 PTGDSP41222 190 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 RPS5P46782 204 aaKnown RBP18.03■□□□□ 0.48
TRIM47-204ENST00000587339 SSR4P51571 173 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 RAB40BQ12829 278 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 PLBD1Q6P4A8 553 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 ARHGAP11AQ6P4F7 1023 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 IGFN1Q86VF2 1251 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 RAB2BQ8WUD1 216 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 ASB15Q8WXK1 588 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 ST8SIA1Q92185 356 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 COG8Q96MW5 612 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 ERMAPQ96PL5 475 aaPredicted RBP18.03■□□□□ 0.48
TRIM47-204ENST00000587339 MRPS18AQ9NVS2 196 aaKnown RBP18.03■□□□□ 0.48
TRIM47-204ENST00000587339 P4HTMQ9NXG6 502 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 TMED7Q9Y3B3 224 aa18.03■□□□□ 0.48
TRIM47-204ENST00000587339 CHCHD2Q9Y6H1 151 aaPredicted RBP18.03■□□□□ 0.48
TRIM47-204ENST00000587339 IRGMA1A4Y4 181 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 MCIDASD6RGH6 385 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 BLOC1S5-TXNDC5H3BN57 136 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 STMND1H3BQB6 276 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 SUSD5O60279 629 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 RAD1O60671 282 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 WISP1O95388 367 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 ZNF3P17036 446 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 MSX1P28360 303 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 GXYLT1Q4G148 440 aa18.02■□□□□ 0.48
TRIM47-204ENST00000587339 ADGRG3Q86Y34 549 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms