RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 CD3EP07766 207 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 NUDT7P0C024 238 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 FOSL1P15407 271 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 NCF2P19878 526 aaPredicted RBP16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 AQP5P55064 265 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 COPZ1P61923 177 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 SLC35A1P78382 337 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 LARS2Q15031 903 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 LRRC75A-AS1Q8N1F1 130 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 TMEM171Q8WVE6 324 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 MAL2Q969L2 176 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 APH1AQ96BI3 265 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 POTEKPQ9BYX7 375 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 PAIP1Q9H074 479 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 ESRP2Q9H6T0 727 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 DLL4Q9NR61 685 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 CCDC167Q9P0B6 97 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 RNF115Q9Y4L5 304 aa16.85■□□□□ 0.29
CLPTM1-206ENST00000586975 IGKV3D-15A0A087WSY6 115 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 A0A0G2JPF8 293 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 HNRNPCL2B2RXH8 293 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 HNRNPCL3B7ZW38 293 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 C5orf58C9J3I9 102 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 GPR171O14626 319 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 HS3ST1O14792 307 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 ZNF208O43345 1280 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 HNRNPCL1O60812 293 aaKnown RBP16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 MRPL33O75394 65 aaKnown RBP16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 HNRNPCL4P0DMR1 293 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 IMPDH2P12268 514 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 IGHV1-2P23083 117 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 ADSLP30566 484 aaPredicted RBP16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 PDK3Q15120 406 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 RGNQ15493 299 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 ATG4DQ86TL0 474 aaPredicted RBP16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 CLIP4Q8N3C7 705 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 MUCL1Q96DR8 90 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 NAA11Q9BSU3 229 aaPredicted RBP16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 RAD21L1Q9H4I0 556 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 THUMPD1Q9NXG2 353 aaKnown RBP16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 TRAPPC4Q9Y296 219 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 NF1P21359 2839 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 ACANP16112 2415 aa16.84■□□□□ 0.29
CLPTM1-206ENST00000586975 CIB4A0PJX0 185 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 CCT8L1PA6NM43 557 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 FAAHO00519 579 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 DNPH1O43598 174 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 EIF1BO60739 113 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 PRG2P13727 222 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 GGT1P19440 569 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 BNIP2Q12982 314 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 CEACAM7Q14002 265 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 PPA1Q15181 289 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 ZNF311Q5JNZ3 666 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 NCMAPQ5T1S8 102 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 FBXW9Q5XUX1 488 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 WBP2NLQ6ICG8 309 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 CASP12Q6UXS9 341 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 YTHDF3Q7Z739 585 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 SPDL1Q96EA4 605 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 THOC1Q96FV9 657 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 C18orf12Q96KH6 178 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 Q96MF0 132 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 SMR3AQ99954 134 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 USB1Q9BQ65 265 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 TMEM204Q9BSN7 226 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 CCDC28BQ9BUN5 200 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 ADAM19Q9H013 955 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 ARMC7Q9H6L4 198 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 INTS9Q9NV88 658 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 DSPPQ9NZW4 1301 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 LAMP3Q9UQV4 416 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 ZFHX3Q15911 3703 aa16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 FLNAP21333 2647 aaKnown RBP16.83■□□□□ 0.28
CLPTM1-206ENST00000586975 A0A096LPI6 279 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 RAD51DO75771 328 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 IDUAP35475 653 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 ACAA2P42765 397 aaKnown RBP16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 BSPH1Q075Z2 132 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 FAPQ12884 760 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 OR7A5Q15622 319 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 AGKQ53H12 422 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 Q71RC1 249 aaPredicted RBP16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 HDXQ7Z353 690 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 SERPINA11Q86U17 422 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 FUNDC1Q8IVP5 155 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 ZNF611Q8N823 705 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 NEUROG1Q92886 237 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 SPATA9Q9BWV2 254 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 CXorf56Q9H5V9 222 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 SLAMF8Q9P0V8 285 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 IFT52Q9Y366 437 aa16.82■□□□□ 0.28
CLPTM1-206ENST00000586975 DPRXA6NFQ7 191 aa16.81■□□□□ 0.28
CLPTM1-206ENST00000586975 FRS3O43559 492 aa16.81■□□□□ 0.28
CLPTM1-206ENST00000586975 AKR7A3O95154 331 aa16.81■□□□□ 0.28
CLPTM1-206ENST00000586975 CNOT4O95628 575 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-206ENST00000586975 GPIP06744 558 aa16.81■□□□□ 0.28
CLPTM1-206ENST00000586975 THBS1P07996 1170 aa16.81■□□□□ 0.28
CLPTM1-206ENST00000586975 INHBBP09529 407 aa16.81■□□□□ 0.28
CLPTM1-206ENST00000586975 NTF4P34130 210 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms