RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 RPL36Q9Y3U8 105 aaKnown RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 MRPS18BQ9Y676 258 aaKnown RBP5.64□□□□□ -1.51
LIG3-206ENST00000586058 TRAV27A0A087WT01 109 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 A0A1W2PNU3 283 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 ANKRD33BA6NCL7 494 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 EFCAB10A6NFE3 127 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ARGFXA6NJG6 315 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 EIF4E1BA6NMX2 242 aaKnown RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 MCIDASD6RGH6 385 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 PRR23D1E9PI22 279 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 XKRYO14609 159 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 SIAH2O43255 324 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 RGS10O43665 173 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 TRIM3O75382 744 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 SMNDC1O75940 238 aaKnown RBP eCLIP5.63□□□□□ -1.51
LIG3-206ENST00000586058 OR7A10O76100 309 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 CH25HO95992 272 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 CELA2AP08217 269 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 PRR23D2P0DMB1 279 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 PRKAR1AP10644 381 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 NR2C1P13056 603 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ZNF17P17021 662 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 PRKCAP17252 672 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 MYL12AP19105 171 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 HK1P19367 917 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ELK4P28324 431 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ADH6P28332 368 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 FMO3P31513 532 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 IDUAP35475 653 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ATP6V1E1P36543 226 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 RPL5P46777 297 aaKnown RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 PCYT1AP49585 367 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 SH3BGRP55822 239 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 DSCR4P56555 118 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 RPS7P62081 194 aaKnown RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 ARG2P78540 354 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 PLGLB1Q02325 96 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 LGALS3BPQ08380 585 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 CDC20Q12834 499 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 FOXF1Q12946 379 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 C1DQ13901 141 aaKnown RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 ZNF791Q3KP31 576 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 KLHL22Q53GT1 634 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 CLEC12AQ5QGZ9 265 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 C6orf141Q5SZD1 244 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ARMC4Q5T2S8 1044 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 RAET1LQ5VY80 246 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 C12orf73Q69YU5 71 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 H3F3CQ6NXT2 135 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 CCDC81Q6ZN84 652 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 C16orf47Q6ZP98 133 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 AHSA2Q719I0 299 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ATG4DQ86TL0 474 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 DTX1Q86Y01 620 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ENTHD1Q8IYW4 607 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 BEST3Q8N1M1 668 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ARMC10Q8N2F6 343 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 GALNT16Q8N428 558 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 TCEANCQ8N8B7 351 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 TMEM178AQ8NBL3 297 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 PSD4Q8NDX1 1056 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 OR13C2Q8NGS9 318 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 C9orf43Q8TAL5 461 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 CNIH3Q8TBE1 160 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 TMEM163Q8TC26 289 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 GPR119Q8TDV5 335 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 PAQR8Q8TEZ7 354 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 FCGR1BQ92637 280 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 OTULINQ96BN8 352 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 MRPL48Q96GC5 212 aaKnown RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 PIGQQ9BRB3 760 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 FUZQ9BT04 418 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ZNF426Q9BUY5 554 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 ANGPTL4Q9BY76 406 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 POLDIP3Q9BY77 421 aaKnown RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 DSN1Q9H410 356 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 FN3KQ9H479 309 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 EGLN3Q9H6Z9 239 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 GPR83Q9NYM4 423 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 IL20Q9NYY1 176 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 TVP23BQ9NYZ1 205 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 UBAP1Q9NZ09 502 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 STMN3Q9NZ72 180 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 MED11Q9P086 117 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 OSGIN1Q9UJX0 560 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 RNF6Q9Y252 685 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 KLF13Q9Y2Y9 288 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 CORINQ9Y5Q5 1042 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 CHCHD2Q9Y6H1 151 aaPredicted RBP5.63□□□□□ -1.51
LIG3-206ENST00000586058 DNAH14Q0VDD8 3507 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 FREM3P0C091 2139 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 LAMA1P25391 3075 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 OTOGLQ3ZCN5 2332 aa5.63□□□□□ -1.51
LIG3-206ENST00000586058 IGLV3-32A0A0A0MS00 114 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 A0A1W2PRG6 482 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 OR5H15A6NDH6 313 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 TMEM200CA6NKL6 621 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 SLC22A31A6NKX4 558 aa5.62□□□□□ -1.51
LIG3-206ENST00000586058 PTGES3LE9PB15 166 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms