RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 MED18Q9BUE0 208 aa11.83□□□□□ -0.52
SREBF1-223ENST00000584760 SPATA9Q9BWV2 254 aa11.83□□□□□ -0.52
SREBF1-223ENST00000584760 TMED7Q9Y3B3 224 aa11.83□□□□□ -0.52
SREBF1-223ENST00000584760 HDGFL3Q9Y3E1 203 aa11.83□□□□□ -0.52
SREBF1-223ENST00000584760 TMEM72A0PK05 275 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 ZNF208O43345 1280 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 DNPH1O43598 174 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 YES1P07947 543 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 TFPIP10646 304 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 PRG2P13727 222 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 ETS2P15036 469 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 GPX2P18283 190 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 PSMB1P20618 241 aaKnown RBP11.82□□□□□ -0.52
SREBF1-223ENST00000584760 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
SREBF1-223ENST00000584760 CLK1P49759 484 aaKnown RBP11.82□□□□□ -0.52
SREBF1-223ENST00000584760 RASGEF1BQ0VAM2 473 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 ZSWIM7Q19AV6 140 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 METTL21CQ5VZV1 264 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 CGB2Q6NT52 195 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 BEND4Q6ZU67 534 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 SERPINA11Q86U17 422 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 RETREG3Q86VR2 466 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 GABRG1Q8N1C3 465 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 DPP10Q8N608 796 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 NFKBIDQ8NI38 313 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 DNAJA3Q96EY1 480 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 ZNF300Q96RE9 604 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-223ENST00000584760 TMEM120AQ9BXJ8 343 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 RSPO3Q9BXY4 272 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-223ENST00000584760 KLHL4Q9C0H6 718 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 ADAM19Q9H013 955 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 TMEM38AQ9H6F2 299 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 PLEKHF2Q9H8W4 249 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 FGFR1OP2Q9NVK5 253 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 ZNF226Q9NYT6 803 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 C6orf203Q9P0P8 240 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-223ENST00000584760 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-223ENST00000584760 LEF1Q9UJU2 399 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-223ENST00000584760 CORO2BQ9UQ03 480 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 IFT52Q9Y366 437 aa11.82□□□□□ -0.52
SREBF1-223ENST00000584760 IGKV3D-15A0A087WSY6 115 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 ZC3H12DA2A288 527 aaKnown RBP11.81□□□□□ -0.52
SREBF1-223ENST00000584760 ZNF716A6NP11 495 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 ZNF724A8MTY0 619 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 C5orf58C9J3I9 102 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 CASKO14936 926 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 GCM2O75603 506 aaPredicted RBP11.81□□□□□ -0.52
SREBF1-223ENST00000584760 LY6G6DO95868 133 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 HEXAP06865 529 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 THBDP07204 575 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 CCNA2P20248 432 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 EDNRAP25101 427 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 MAP2K6P52564 334 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 NKX6-1P78426 367 aaPredicted RBP11.81□□□□□ -0.52
SREBF1-223ENST00000584760 H3F3AP84243 136 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 CDK6Q00534 326 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 ADRM1Q16186 407 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 DHDDSQ86SQ9 333 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 MTDHQ86UE4 582 aaKnown RBP11.81□□□□□ -0.52
SREBF1-223ENST00000584760 TSPEARQ8WU66 669 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 SLC35B4Q969S0 331 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 OR10A4Q9H209 315 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 CCDC134Q9H6E4 229 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 CACYBPQ9HB71 228 aaKnown RBP11.81□□□□□ -0.52
SREBF1-223ENST00000584760 TMEM181Q9P2C4 612 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 PRDM4Q9UKN5 801 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 ZNF232Q9UNY5 417 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 NDUFAF1Q9Y375 327 aa11.81□□□□□ -0.52
SREBF1-223ENST00000584760 EVPLLA8MZ36 301 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ZNF814B7Z6K7 855 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ANGPT2O15123 496 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 FRS3O43559 492 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 RAMP1O60894 148 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 TROVE2P10155 538 aaKnown RBP eCLIP11.8□□□□□ -0.52
SREBF1-223ENST00000584760 IMPDH2P12268 514 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 PPP3CBP16298 524 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 LOXP28300 417 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-223ENST00000584760 PCSK6P29122 969 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 PRKAR1BP31321 381 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 OR3A2P47893 321 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 GUCY1A3Q02108 690 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 PDK3Q15120 406 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 RUNDC3AQ59EK9 446 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ZNF311Q5JNZ3 666 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ANKRD34AQ69YU3 496 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 WBP2NLQ6ICG8 309 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 REEP3Q6NUK4 255 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 COMTD1Q86VU5 262 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 CXorf67Q86X51 503 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-223ENST00000584760 KRTAP1-3Q8IUG1 177 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 DDIT4LQ96D03 193 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ZHX1-C8orf76Q96EF9 292 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ZC3HAV1LQ96H79 300 aaKnown RBP11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ANKRD27Q96NW4 1050 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 REPIN1Q9BWE0 567 aaKnown RBP11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ACTR6Q9GZN1 396 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 ARMC7Q9H6L4 198 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 FANCFQ9NPI8 374 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 MED4Q9NPJ6 270 aa11.8□□□□□ -0.52
SREBF1-223ENST00000584760 TRAPPC4Q9Y296 219 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms