RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SLC30A8Q8IWU4 369 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 TUSC5Q8IXB3 177 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 SMYD1Q8NB12 490 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 BHLHE22Q8NFJ8 381 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 OR8J3Q8NGG0 315 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 RP9Q8TA86 221 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 LINC01560Q8TB33 94 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 SLC35B4Q969S0 331 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 ADAM19Q9H013 955 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 MCCC2Q9HCC0 563 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 PLSCR4Q9NRQ2 329 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 KLHL28Q9NXS3 571 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 TMEM181Q9P2C4 612 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 KLHL13Q9P2N7 655 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 RPS6KB2Q9UBS0 482 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 PRDM4Q9UKN5 801 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 NAV2Q8IVL1 2488 aa11.24□□□□□ -0.61
SMARCE1-218ENST00000582955 ZC3H12DA2A288 527 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 ZNF208O43345 1280 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 CYTIPO60759 359 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 MFN2O95140 757 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 YES1P07947 543 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 COX4I1P13073 169 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 PCGF2P35227 344 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 CD79BP40259 229 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 MAP2K6P52564 334 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 PCBP3P57721 371 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 RGS8P57771 180 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 DMTNQ08495 405 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 RASGEF1BQ0VAM2 473 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 BNIP2Q12982 314 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 VMACQ2NL98 169 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 INTS11Q5TA45 600 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 NUFIP2Q7Z417 695 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 COMTD1Q86VU5 262 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 SLC26A7Q8TE54 656 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 FAM222BQ8WU58 562 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 PSD2Q9BQI7 771 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 TACO1Q9BSH4 297 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 RSPO3Q9BXY4 272 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 KLHL4Q9C0H6 718 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 GP6Q9HCN6 339 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 ELOVL5Q9NYP7 299 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 MAST4O15021 2626 aa11.23□□□□□ -0.61
SMARCE1-218ENST00000582955 SH3D21A4FU49 640 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 M0QX08 132 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 AIM2O14862 343 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 DNPH1O43598 174 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 SNX3O60493 162 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 IMPDH2P12268 514 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 IDUAP35475 653 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 GZMMP51124 257 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 SLC35A1P78382 337 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 FBXW10Q5XX13 1052 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 ABLIM2Q6H8Q1 611 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 PATL1Q86TB9 770 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 OR52E4Q8NGH9 312 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 RNF217Q8TC41 542 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 ZNF775Q96BV0 537 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 LURAP1Q96LR2 239 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 ZNF300Q96RE9 604 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 NAA11Q9BSU3 229 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 TRIM2Q9C040 744 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 FANCFQ9NPI8 374 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 TESQ9UGI8 421 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 NDRG3Q9UGV2 375 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 TRAPPC4Q9Y296 219 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 ABCA12Q86UK0 2595 aa11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 ANKHD1Q8IWZ3 2542 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-218ENST00000582955 FBN2P35556 2912 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 A0A1B0GWA3 101 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 ELOA3DA6NLF2 546 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 A8MVM7 634 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 C16orf97H3BN30 126 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 CASKO14936 926 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 EIF1BO60739 113 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 GCM2O75603 506 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 GPIP06744 558 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 EPXP11678 715 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 FPR1P21462 350 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 HTR2AP28223 471 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 UGT2B10P36537 528 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 CEACAM7Q14002 265 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 OR7A5Q15622 319 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 DUSP7Q16829 419 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 ELOA3BQ3SY89 546 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 ERICH5Q6P6B1 374 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 BEND4Q6ZU67 534 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 RANBP3LQ86VV4 465 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 CALHM3Q86XJ0 350 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 TREML1Q86YW5 311 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 ELOA3Q8NG57 546 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 VANGL1Q8TAA9 524 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 PIGXQ8TBF5 258 aa11.21□□□□□ -0.61
SMARCE1-218ENST00000582955 DACH2Q96NX9 599 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms