RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 WIPF1O43516 503 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 HCRTR2O43614 444 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 IFNA2P01563 188 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SEMG1P04279 462 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 GLI4P10075 376 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ZNF17P17021 662 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 BMP7P18075 431 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ELK4P28324 431 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 UQCRC1P31930 480 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 MSX2P35548 267 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 APOBEC1P41238 236 aaKnown RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 RBM34P42696 430 aaKnown RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SLC1A3P43003 542 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CLK1P49759 484 aaKnown RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ST13P50502 369 aaKnown RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 DSCR4P56555 118 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 TAS2R41P59536 307 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ELF3P78545 371 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SKP2Q13309 424 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CCNIQ14094 377 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 DGCR6Q14129 220 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 GXYLT1Q4G148 440 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ZNF468Q5VIY5 522 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 TIGD3Q6B0B8 471 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 HMBOX1Q6NT76 420 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ZNF836Q6ZNA1 936 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 RRM2BQ7LG56 351 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 GRINAQ7Z429 371 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SLC22A16Q86VW1 577 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ZNF227Q86WZ6 799 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CARM1Q86X55 608 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 LIX1LQ8IVB5 337 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ZDHHC21Q8IVQ6 265 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 PRR22Q8IZ63 422 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ADGRG5Q8IZF4 528 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 RNF113BQ8IZP6 322 aaKnown RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SVOPLQ8N434 492 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SMYD1Q8NB12 490 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SLC25A43Q8WUT9 341 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CANT1Q8WVQ1 401 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 NTNG2Q96CW9 530 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 MRGPRX4Q96LA9 322 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 PRRC1Q96M27 445 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ZNF300Q96RE9 604 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 PIP5K1AQ99755 562 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 FNDC11Q9BVV2 318 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CHID1Q9BWS9 393 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 VCXQ9H320 206 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 REEP1Q9H902 201 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ZFP64Q9NPA5 681 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SERINC1Q9NRX5 453 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 PNPLA3Q9NST1 481 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 FOXD3Q9UJU5 478 aaPredicted RBP7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ACAD8Q9UKU7 415 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ICAM5Q9UMF0 924 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 FAM215AQ9Y5M1 114 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 EML6Q6ZMW3 1958 aa7.89□□□□□ -1.15
PDLIM1P3-201ENST00000582370 TRAPPC13A5PLN9 417 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ARRDC5A6NEK1 342 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 NPIPA2E9PIF3 369 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 NPIPA3F8WFD2 350 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ETV2O00321 342 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CHP2O43745 196 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 MGRN1O60291 552 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 WDR1O75083 606 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 TRIM3O75382 744 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 NUDT14O95848 222 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CST1P01037 141 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 C1QCP02747 245 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 UBTFL6P0CB48 400 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 EPXP11678 715 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 RRM2P31350 389 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 RFC3P40938 356 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ASCL1P50553 236 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 HMGA2P52926 109 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CRYBA2P53672 197 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 GAS1P54826 345 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 EPS8Q12929 822 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 TRAM2Q15035 370 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SF3B4Q15427 424 aaKnown RBP eCLIP7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 NPTX1Q15818 432 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 MAPK14Q16539 360 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 FBXL19-AS1Q494R0 122 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ANKDD1AQ495B1 522 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SLC25A53Q5H9E4 307 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 OR2T5Q6IEZ7 315 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 VRK2Q86Y07 508 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 HIPK1Q86Z02 1210 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SULF2Q8IWU5 870 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CDK20Q8IZL9 346 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 OFCC1Q8IZS5 231 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 TMCO5AQ8N6Q1 288 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 FADS6Q8N9I5 356 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 OR4K17Q8NGC6 315 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 OR2T29Q8NH02 315 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 ZNF563Q8TA94 476 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 DUSP19Q8WTR2 217 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 RNASE6Q93091 150 aaKnown RBP7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 SLC38A4Q969I6 547 aa7.88□□□□□ -1.15
PDLIM1P3-201ENST00000582370 CENPNQ96H22 339 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms