RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PLAUP00749 431 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 ADAP00813 363 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 T-ENOLP0DO92 83 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 IL32P24001 234 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 DIO1P49895 249 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 KCNJ10P78508 379 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 RASGEF1BQ0VAM2 473 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 PDK3Q15120 406 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 YTHDF3Q7Z739 585 aaKnown RBP18.55■□□□□ 0.56
CCDC42-203ENST00000581598 RETREG3Q86VR2 466 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 CMIPQ8IY22 773 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 TRIML2Q8N7C3 387 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 NSL1Q96IY1 281 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 BDH2Q9BUT1 245 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 ZNF701Q9NV72 531 aaPredicted RBP18.55■□□□□ 0.56
CCDC42-203ENST00000581598 LEF1Q9UJU2 399 aaPredicted RBP18.55■□□□□ 0.56
CCDC42-203ENST00000581598 LIPT1Q9Y234 373 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 NDUFAF1Q9Y375 327 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 IGKV3D-15A0A087WSY6 115 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 DNPH1O43598 174 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 RRP9O43818 475 aaKnown RBP18.54■□□□□ 0.56
CCDC42-203ENST00000581598 PTH2RP49190 550 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 CLK1P49759 484 aaKnown RBP18.54■□□□□ 0.56
CCDC42-203ENST00000581598 ANXA11P50995 505 aaKnown RBP18.54■□□□□ 0.56
CCDC42-203ENST00000581598 HPCAP84074 193 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 PLAURQ03405 335 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 CHRNEQ04844 493 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 BNIP1Q12981 228 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 TAB1Q15750 504 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 NCMAPQ5T1S8 102 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 ABLIM2Q6H8Q1 611 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 SSX8Q7RTT4 187 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 GRINAQ7Z429 371 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 DPP10Q8N608 796 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 TMEM171Q8WVE6 324 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 GTF2H4Q92759 462 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 PMM1Q92871 262 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 ZG16BQ96DA0 208 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 PERPQ96FX8 193 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 TRNT1Q96Q11 434 aaKnown RBP18.54■□□□□ 0.56
CCDC42-203ENST00000581598 SMR3AQ99954 134 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 POTEKPQ9BYX7 375 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 CHRNA9Q9UGM1 479 aa18.54■□□□□ 0.56
CCDC42-203ENST00000581598 SULT2B1O00204 365 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 ANGPT2O15123 496 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 BCAS1O75363 584 aaPredicted RBP18.53■□□□□ 0.56
CCDC42-203ENST00000581598 PMS2P2O95744 297 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 CALB2P22676 271 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 MAGEA8P43361 318 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 LTBQ06643 244 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 GPAT3Q53EU6 434 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 REP15Q6BDI9 236 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 SEZ6L2Q6UXD5 910 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 LRRC74BQ6ZQY2 392 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 RNF130Q86XS8 419 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 ZNF563Q8TA94 476 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 RCN3Q96D15 328 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 Q96MF0 132 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 PANX1Q96RD7 426 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 ZNF300Q96RE9 604 aaPredicted RBP18.53■□□□□ 0.56
CCDC42-203ENST00000581598 SLC38A1Q9H2H9 487 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 CXorf56Q9H5V9 222 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 ESRP2Q9H6T0 727 aaKnown RBP18.53■□□□□ 0.56
CCDC42-203ENST00000581598 RMND5AQ9H871 391 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 CTPS2Q9NRF8 586 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 HDGFL3Q9Y3E1 203 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 NSD1Q96L73 2696 aaPredicted RBP18.53■□□□□ 0.56
CCDC42-203ENST00000581598 USF3Q68DE3 2245 aa18.53■□□□□ 0.56
CCDC42-203ENST00000581598 HEXAP06865 529 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 FESP07332 822 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 TSC22D1Q15714 1073 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 PAGE3Q5JUK9 113 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 SLC2A7Q6PXP3 512 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 CLEC9AQ6UXN8 241 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 BHLHA15Q7RTS1 189 aaPredicted RBP18.52■□□□□ 0.56
CCDC42-203ENST00000581598 GALNT5Q7Z7M9 940 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 AKAP1Q92667 903 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC42-203ENST00000581598 ITCHQ96J02 903 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 PRSS50Q9UI38 385 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 PRDM4Q9UKN5 801 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 RNF115Q9Y4L5 304 aa18.52■□□□□ 0.56
CCDC42-203ENST00000581598 AGAP5A6NIR3 686 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 FAAHO00519 579 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 MRASO14807 208 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 C1QCP02747 245 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 CD3EP07766 207 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 HOXB9P17482 250 aaPredicted RBP18.51■□□□□ 0.55
CCDC42-203ENST00000581598 COX5AP20674 150 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 RPS4Y1P22090 263 aaKnown RBP18.51■□□□□ 0.55
CCDC42-203ENST00000581598 HTR3AP46098 478 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 MNAT1P51948 309 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 SYPL1Q16563 259 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 LRIF1Q5T3J3 769 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 HACD2Q6Y1H2 254 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 DNAJC14Q6Y2X3 702 aaPredicted RBP18.51■□□□□ 0.55
CCDC42-203ENST00000581598 ADGRG3Q86Y34 549 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 ANKFN1Q8N957 763 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 LILRB1Q8NHL6 650 aaPredicted RBP18.51■□□□□ 0.55
CCDC42-203ENST00000581598 ZHX1-C8orf76Q96EF9 292 aa18.51■□□□□ 0.55
CCDC42-203ENST00000581598 INPP5KQ9BT40 448 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms